Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0373 ATGACGATGTTCTTTTTTCCTATTCTCTGTGTTTTTCTATCTACTTTGTTTATTTTCTCTTTCCTCTTTCCCCGAGCATCCAGATTCCGGCGTTTCCGGTTGCCGCCGGGGAACCTGGGTCTGCCGCTGATCGGAGAGACTTTGCAGTTGATCTCTGCTTACAAGACGGAGAATCCAGAACCGTTTATTGATGAGCGGGTGAGGCGGTTCGGACCGGTTTTCACGACGCATTTGTTTGGAGAACCGACGGTTTTCTCTGCCGATTGGGAGACGAACCGGTTTATTCTTCAGAATGAGGAGAAGCTTTTCGAGTGTAGCTACCCCGGTTCGATTTCCAATTTGTTGGGAAGGCATTCTTTGTTGTTGATGAAAGGAAATCTTCATAAACGAATGCATTCCCTCACTATGAGCTTCGCTAATTCCTCGATTATTCGGAACCATCTGTTGGTTGATGTAGACCGGTTGATTCGGCTCAATATGGATTCCTGGACCGGCCGGATTTTCCTCATGGAGGAAGCCAAAAAGATAACTTTTGAGTTAGCAGTGAAGCAACTGATGAGTTTTGATCCATGCGAATGGACAGAGAATTTGATGAAAGAATACCTTCTTGTCATTGAAGGTTTCTTTACCATCCCTTTCCCTCTCTTTTCCTCCACTTACCGCAGAGCCATTCAAGCAAGGAGTAAGGTGGCAGAGGCATTGAGTTTAGTGGTTAGAGAAAGAAGAAAAGAAAGTGAAGAAGGGAAAAGAAAGGAAGACATGCTAGGAGCGCTGCTGGCCGGAGAAGAAGCTCTTTCCGATGAGCAAATAGTTGATTTCTTATTAGCTTTATTGGTGGCCGGATATGAAACCACCTCAACCACCATGACTCTCGCCGTTAAGTTCTTGACGGAGACGCCGCTGGCTTTGGCTCAACTCCAGGATGAACATGAGCAAATCAAAGCAAGGAAGAAAGAATCAGAGGATCTGCAATGGAATGATTACAAGTCCATGCCATTCACCCAATGTGTTGTGAATGAGACCTTAAGAGTTTCCAACATAATCAGTGGGATATTTAGGAGAGCAATGACAGATATCAATATCAAAGGCTATACAATTCCAAAGGGATGGAAGGTCTTTGCTTCATTTCGTGCGGTTCATTTAAACCATGATAATTTTAAAGATGCTCGCTCCTTTAACCCATGGCGATGGCAGCAGAATAGCACAGGCGCAACAAGCACCGTACAATTTACACCCTTTGGAGGCGGCCAAAGGTTATGCCCAGGTTATGAGCTTGCTAGAGTAGAACTCTCCATTTTCCTTCACCACATTGTTACCCGTTTCAGTTGGACTCCTGCAGAAGATGATAAGTTGGTATTTTTTCCAACAACAAGGACACAGAAGCGTTACCCCATCAATGTGATGCCTAAGAAAGATTCTAGGAAATGTAAAGAGAGTATGATCCAGAAAAATACATAA 1458 44.17 MTMFFFPILCVFLSTLFIFSFLFPRASRFRRFRLPPGNLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGRHSLLLMKGNLHKRMHSLTMSFANSSIIRNHLLVDVDRLIRLNMDSWTGRIFLMEEAKKITFELAVKQLMSFDPCEWTENLMKEYLLVIEGFFTIPFPLFSSTYRRAIQARSKVAEALSLVVRERRKESEEGKRKEDMLGALLAGEEALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQDEHEQIKARKKESEDLQWNDYKSMPFTQCVVNETLRVSNIISGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNHDNFKDARSFNPWRWQQNSTGATSTVQFTPFGGGQRLCPGYELARVELSIFLHHIVTRFSWTPAEDDKLVFFPTTRTQKRYPINVMPKKDSRKCKESMIQKNT 485
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 51158760 51163026 - evm.model.ptg000006l.952 HCH1g0373 538392
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0373 485 PANTHER CYTOCHROME P450 26 33 446 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
HCH1g0373 485 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH1g0373 485 Coils Coil 303 323 - -
HCH1g0373 485 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 FunFam Cytochrome P450 90A1 24 470 - -
HCH1g0373 485 Pfam Cytochrome P450 209 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 SUPERFAMILY Cytochrome P450 28 469 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 Gene3D Cytochrome P450 25 469 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g0373 485 CDD CYP90-like 66 469 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0666 HCH-Chr13:5296722 HCH1g0373 HCH-Chr1:51158760 5.90E-78 dispersed
HCH1g0373 HCH-Chr1:51158760 HCH6g0114 HCH-Chr6:1443161 4.10E-98 dispersed
HCH13g0889 HCH-Chr13:10014381 HCH1g0373 HCH-Chr1:51158760 1.30E-85 transposed
HCH6g1791 HCH-Chr6:50224219 HCH1g0373 HCH-Chr1:51158760 9.20E-80 transposed
HCH1g0373 HCH-Chr1:51158760 HCH2g0262 HCH-Chr2:39136812 2.50E-55 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0373 K09588 - csv:101216594 762.681