Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH1g0468 | ATGAGAATCATCACTCTAATTCTTCATGCTGTTGCATATCACCAAGATCCACTTAAGGGATCACTGATGATCACCCTTAGTTGCATTTGTTGGTCAAGTTTCGTCATTCTCCAGGCAATTACACTAGAATTGTACCCGGCAGAGCTATCTCTTACAACTTTAATATGCTTGGTGGGCACAATGGAAAGCACTGTGGTGGCTTTGATAATGGAAAGAGGAAACCCTGCAGCTTGGTCATTGCACTTTGACAGTCAACTCCTAGCAGTAGTTTATGGTGGAATAATAAATTCAAGGATTGCTTATTATATTCAAGCAGTGGTAGTGCAGAAAAAAGAGCCGGTTTTTTTTACTGCATTCAACCCTCTAGGCATGATTGTGGTTGCAATTATGAGCTCCTTCATCTTGTTGAGATCATGTACTTGGGAAGGGTTATTGGAGCAATTGTCATCATCGTTGGCTTGTACTTGGTTTTGTGGGGCAAAAGAAAAGATCAACTTATTGTAA | 504 | 40.28 | MRIITLILHAVAYHQDPLKGSLMITLSCICWSSFVILQAITLELYPAELSLTTLICLVGTMESTVVALIMERGNPAAWSLHFDSQLLAVVYGGIINSRIAYYIQAVVVQKKEPVFFTAFNPLGMIVVAIMSSFILLRSCTWEGLLEQLSSSLACTWFCGAKEKINLL | 167 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 53260165 | 53261268 | + | evm.model.ptg000006l.857 | HCH1g0468 | 538487 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH1g0468 | 167 | PANTHER | WAT1-RELATED PROTEIN | 16 | 137 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| HCH1g0468 | 167 | Pfam | EamA-like transporter family | 19 | 142 | IPR000620 | GO:0016020(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH1g0468 | HCH-Chr1:53260165 | HCH1g0471 | HCH-Chr1:53303737 | 2.70E-49 | dispersed | |
| HCH1g0468 | HCH-Chr1:53260165 | HCH1g0469 | HCH-Chr1:53289190 | 7.60E-52 | tandem | |
| HCH1g0468 | HCH-Chr1:53260165 | HCH13g0453 | HCH-Chr13:3142416 | 8.70E-40 | wgd | |
| HCH1g0468 | HCH-Chr1:53260165 | HCH9g0645 | HCH-Chr9:4288877 | 5.30E-37 | wgd |
Pathway information