Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH1g0490 | ATGACGCTTGAGGTTGCGGTCAAGGCTGCTTCTGGTGCCCCTCATATTCTTGGAGACTGTCCTTTTGCTCAAAGGGTCCTTTTAACTTTGGAGGAGAAGAAGGTTCCTTATGAACAAATTCTTATCGATCTATCCGACAAGCCCAAATGGTTTTTGGAAGTGAATCCAGAAGGGAAGGTGCCTGTTTTGAAGATTGATGGAAAATGGGTTGCTGATTCTGATGTCATTGTTGGGATTCTTGAGGAAAAGTTCCCTGAGCCTTCGCTTGTTACCCCTCCTGAATTTTCTTCAGTGGGATCAAAACTATTTGGTGCCTTTGTAAAATTCTTATTCAGCAAGGATCCAACTGATGGTTCAGAGCAGGTTTTGCTTGATGAGTTGAAGGCATTGGATGAGCATCTCAAGGATCATGGTCCTTATGTTGCTGGAGAGAAGATAACTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTCGATATTACTCTCGGTCATTTCAAGAAGTGGGCTATCCCCGAAAACTTAACCCACGTCAACAACTACAAAAAGTTGCTTTTCTCTCGAGAATCTTTTGAGAAGACAACGGCTGCCAAGGAACATGTAATTGCAGGATGGGCCCCCAAGGTCAATGCATGA | 639 | 43.66 | MTLEVAVKAASGAPHILGDCPFAQRVLLTLEEKKVPYEQILIDLSDKPKWFLEVNPEGKVPVLKIDGKWVADSDVIVGILEEKFPEPSLVTPPEFSSVGSKLFGAFVKFLFSKDPTDGSEQVLLDELKALDEHLKDHGPYVAGEKITAVDLSLAPKLYHLDITLGHFKKWAIPENLTHVNNYKKLLFSRESFEKTTAAKEHVIAGWAPKVNA | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 53707843 | 53710063 | - | evm.model.ptg000006l.835 | HCH1g0490 | 538509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH1g0490 | 212 | Pfam | Glutathione S-transferase, C-terminal domain | 120 | 182 | - | - | |
HCH1g0490 | 212 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 1 | 89 | - | - | |
HCH1g0490 | 212 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 66 | 212 | IPR010987 | - | |
HCH1g0490 | 212 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 3 | 209 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro) | |
HCH1g0490 | 212 | CDD | GST_N_family | 15 | 77 | - | - | |
HCH1g0490 | 212 | SFLD | Glutathione Transferase (cytosolic) | 19 | 182 | IPR040079 | - | |
HCH1g0490 | 212 | SUPERFAMILY | GST C-terminal domain-like | 98 | 210 | IPR036282 | - | |
HCH1g0490 | 212 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
HCH1g0490 | 212 | Gene3D | - | 90 | 212 | - | - | |
HCH1g0490 | 212 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
HCH1g0490 | 212 | SUPERFAMILY | Thioredoxin-like | 18 | 87 | IPR036249 | - | |
HCH1g0490 | 212 | CDD | GST_C_DHAR | 89 | 209 | - | - | |
HCH1g0490 | 212 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 82 | IPR004045 | - | |
HCH1g0490 | 212 | SFLD | Main (cytGST) | 19 | 182 | - | - | |
HCH1g0490 | 212 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 90 | 212 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g0490 | HCH-Chr1:53707843 | HCH9g0425 | HCH-Chr9:2673207 | 4.40E-73 | dispersed | |
HCH1g0490 | HCH-Chr1:53707843 | HCH1g0491 | HCH-Chr1:53721209 | 2.60E-105 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH1g0490 | K21888 | - | rcu:8260843 | 351.288 |