Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0509 ATGACATTCATCATTTTGCCTGCTTCGAGAGTGAATTGCAACTTTGGATTATCATCACTCTCGTCTTCGACTTGTGTTTCAGTTTCTTGCATCCCCTCTTCGTTTAGAAGAATAAAAATCACGAGCCCCGTTTTCTCGCCTTCTCTTAAACTTAAAAAACGAGCATCTGGAAGAGCCACAGCTCTGGTTTCTGTGAAAATGGCATCTGGAATTGTGCAGGAAGTTCTTCCCCCAGCGCTCACTTCTGCTTCAGAACCACCTCCTCTCTTTGATGGAACAACAAGGCTATATATATCTTATACATGTCCTTATGCTCAGCGTGTGTGGATAACCCGGAACTGTAAGGGTCTGCAGAAAAAGATACAATTGATTCCTATTGATCTAAAAGACAGGCCTTCTTGGTACAAGGACAAAGTTTATCCAGCTAACAAGGTGCCAGCTCTGGAACATAACAATGAAGTCAAAGGGGAGAGTTTAGACTTGATTAAATATATTGACAGCAACTTTGAAGGACCTTCATTATTTCCTGATGACCCTGGAAAGAGAGAATTTGCTGAAGAGTTGATAACTTACACTGACACGTTCCATAAATCGGTGATTTCTTCATTTAAAGGAGATGCAAATGAAGCTGATGTGGCATTTGACTACCTTGAATCAGCTCTTTCAAAATTTGATGATGGCCCTTTTTTCCTAGGTCAGTTCAGTCTGGTGGATATAGCTTATGCTCCCTTTATTGAAAGATTCCAGCCCTTCTTATTGGAAGTAAAGATGTATGACATCACTGTTGGCAGGCCAAATTTGGCAGCTTGGATTCAGGAGATGAACAAGATTGAGGCTTATCGATTAACGAAGCACGATCCAAAGGAGCTTGTTGAAAGCTATAAGCAGCGTTTCTTGGCTCGTTTATGA 909 41.14 MTFIILPASRVNCNFGLSSLSSSTCVSVSCIPSSFRRIKITSPVFSPSLKLKKRASGRATALVSVKMASGIVQEVLPPALTSASEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQKKIQLIPIDLKDRPSWYKDKVYPANKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPGKREFAEELITYTDTFHKSVISSFKGDANEADVAFDYLESALSKFDDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKMYDITVGRPNLAAWIQEMNKIEAYRLTKHDPKELVESYKQRFLARL 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53948519 53952940 - evm.model.ptg000006l.816 HCH1g0509 538528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0509 302 Pfam Glutathione S-transferase, N-terminal domain 96 172 IPR004045 -
HCH1g0509 302 FunFam Lambda class glutathione S-transferase 171 301 - -
HCH1g0509 302 SUPERFAMILY GST C-terminal domain-like 169 298 IPR036282 -
HCH1g0509 302 FunFam Glutathione S-transferase L2, chloroplastic 67 170 - -
HCH1g0509 302 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 173 IPR004045 -
HCH1g0509 302 Gene3D Glutaredoxin 67 170 - -
HCH1g0509 302 SFLD Glutathione Transferase (cytosolic) 95 276 IPR040079 -
HCH1g0509 302 SUPERFAMILY Thioredoxin-like 83 174 IPR036249 -
HCH1g0509 302 Gene3D - 171 302 - -
HCH1g0509 302 PANTHER GLUTATHIONE S-TRANSFERASE L1 67 301 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
HCH1g0509 302 CDD GST_C_Lambda 178 295 - -
HCH1g0509 302 SFLD Main (cytGST) 95 276 - -
HCH1g0509 302 Pfam Glutathione S-transferase, C-terminal domain 213 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0235 HCH-Chr11:2139711 HCH1g0509 HCH-Chr1:53948519 4.40E-90 dispersed
HCH11g0236 HCH-Chr11:2148635 HCH1g0509 HCH-Chr1:53948519 4.80E-89 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0509 K00799 - csv:101220995 434.491