Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0614 ATGGATCAATATCCCAAAAATCTCGACGAAGAAACACATAATCCAGAGAAGACTGTAAGAGAAGAAGAAGACGACGACGAGCAAGAAGAAGGACTTGACGATTGGGACGATTGGAATGAAGACGAGGAAGAAGGATATTTGGACTCGAGTTTCTCGTGTTTGTTTTGCAATTCTAAGTATAATGACTGCGACACGCTGTTTAATCACTGCAATTTGGTTCATCATTTCGATTTTCATGGCATTAGAAAGGCTCTGGGTTTAGATTTTTATGGGTCCTTCAAAATCATCAACTACATTCGATCTCAGGTAGCAAAAAATAGGTGTTGGAGCTGTGGTCTCTTGTGTCAATCAAACCAGGACTTGCAGAACCATTTACACAAAACACTGAATATCAAAGACATCGAGCTTCTTTGGGATGATGAGAAATATCTGAAACCCTTTAGGCAAGATGATTCGCTCCTGTACAGTTTTGCCAATGATGAAGAAGAAGATGATGATATTTCACTTAGCAACAATAATATTACAAGGCATATTGGAGGTAATTGCAATGATGCACAAATATTTAAAGAAAGTTCTCCATTTAACCCCAACCAGAAGAAGGAAAATGGTAGGGAAGGTTGTACTTCTACTTCACATAGTAATTTGAATGTGGAAAGCTTCTTAGAGACCGTGATGGAGAATGCCATGGAAACCACAGAGAATTTGGAACTGGAAGAAGATCAATTAAAATTTCCCAGTCAAAATTATTCTTCAAAGGAGATAAAAAAGGCAAATGAAAACTACTTTGGGGCGTATAGTTCTTTTGGCATACACAGAGAGATGATAAGTGATAAGGTCAGAACCGAAGCTTACATGCAAACAATTTTACATAATCCATCTCTCCTAAACAATGCAGTTGTGATGGACGTGGGTTGTGGAACTGGCATACTAAGTCTCTTTGCTGCAAAAGCGGGTGCATCCAGAGTTATTGCAGTTGAAGCAAGTGATAAAATGGCAGCAGTGGCCACTCAAATTGCAAAAGAAAATGATCTTTGGAGGAATAGGGAACAAACTGGAGATGGTAGCGGGACTAGTGGGATTATGGAAGTAGTTCATGGTATGGTAGAAGAACTTGAAAAAAACATAAATATTCAGCCTTCTAGTGTTGATGTATTATTGAGTGAATGGATGGGCTATTGCCTATTGTACGAGTCAATGCTCAGCTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCGGGAGGTGCAATCTTACCAGATACTGCAACAATTCTTGTTGCAGGATTTGGAATTGGTGGAACAAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGAAAGGAACTTGTTAAAGATGCTGCACAAACTCCCATTGTTGACATTGTGGATTCTAAGGATTTAGTAACCAGTGCTGCAATTCTTCATACATTTGATTTAGCAACTATGCATCCTGATGAAGTAGACTTCACAGCAAGCACTGAGTTGGAACCGATTCTACATTGTCCTGCAGACAAATCCGATACTTCTGAATCTGAGTCATCTTGGTGTTATGGAGTTGTCTTGTGGTTTGAAACTGGTTTTACCAGCAGATTCTGCAAAGAATCACCAACTGTTCTGTCCACATCCCCATACACTCCCAAAACCCACTGGTCTCAGACCATATTAACCTTCAGGGAACCAATTGCTATAGCATCTGGAAAATCTGGCACAGATAAGTCAGCAGCAGTAGGAACTGATGCCTGCCCTGCTGTCAAAATTCATTTGCGCATTAGCATTGTCCGTGCATCTCAACATCGAAGCATCGACATTTCGCTGGAAACTACTGGGATTGCCGGTGATGGTAGGAAGCACCACTGGCCTGTACAACTTTTTTCCCTAAGATAG 1899 40.55 MDQYPKNLDEETHNPEKTVREEEDDDEQEEGLDDWDDWNEDEEEGYLDSSFSCLFCNSKYNDCDTLFNHCNLVHHFDFHGIRKALGLDFYGSFKIINYIRSQVAKNRCWSCGLLCQSNQDLQNHLHKTLNIKDIELLWDDEKYLKPFRQDDSLLYSFANDEEEDDDISLSNNNITRHIGGNCNDAQIFKESSPFNPNQKKENGREGCTSTSHSNLNVESFLETVMENAMETTENLELEEDQLKFPSQNYSSKEIKKANENYFGAYSSFGIHREMISDKVRTEAYMQTILHNPSLLNNAVVMDVGCGTGILSLFAAKAGASRVIAVEASDKMAAVATQIAKENDLWRNREQTGDGSGTSGIMEVVHGMVEELEKNINIQPSSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGIGGTSLPFWENVYGFSMSCVGKELVKDAAQTPIVDIVDSKDLVTSAAILHTFDLATMHPDEVDFTASTELEPILHCPADKSDTSESESSWCYGVVLWFETGFTSRFCKESPTVLSTSPYTPKTHWSQTILTFREPIAIASGKSGTDKSAAVGTDACPAVKIHLRISIVRASQHRSIDISLETTGIAGDGRKHHWPVQLFSLR 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55063263 55068014 - evm.model.ptg000006l.711 HCH1g0614 538633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0614 632 FunFam Protein arginine N-methyltransferase 6 254 419 - -
HCH1g0614 632 Pfam C2H2 type zinc-finger (2 copies) 53 127 IPR041661 -
HCH1g0614 632 MobiDBLite consensus disorder prediction 1 38 - -
HCH1g0614 632 MobiDBLite consensus disorder prediction 21 38 - -
HCH1g0614 632 MobiDBLite consensus disorder prediction 1 20 - -
HCH1g0614 632 Coils Coil 221 241 - -
HCH1g0614 632 Gene3D Vaccinia Virus protein VP39 249 419 IPR029063 -
HCH1g0614 632 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 258 611 IPR025799 GO:0016274(InterPro)|GO:0018216(InterPro)
HCH1g0614 632 SUPERFAMILY beta-beta-alpha zinc fingers 33 172 IPR036236 -
HCH1g0614 632 Pfam Arginine methyltransferase oligomerization subdomain 422 572 - -
HCH1g0614 632 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 229 613 IPR025799 GO:0005634(PANTHER)|GO:0016274(InterPro)|GO:0018216(InterPro)
HCH1g0614 632 Gene3D - 424 623 - -
HCH1g0614 632 CDD AdoMet_MTases 300 418 - -
HCH1g0614 632 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 265 572 IPR029063 -
HCH1g0614 632 Pfam Methyltransferase domain 302 417 IPR013216 GO:0008757(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0614 HCH-Chr1:55063263 HCH8g0668 HCH-Chr8:43418171 7.30E-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0614 K11436 - csv:101215999 914.45