Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH1g0614 | ATGGATCAATATCCCAAAAATCTCGACGAAGAAACACATAATCCAGAGAAGACTGTAAGAGAAGAAGAAGACGACGACGAGCAAGAAGAAGGACTTGACGATTGGGACGATTGGAATGAAGACGAGGAAGAAGGATATTTGGACTCGAGTTTCTCGTGTTTGTTTTGCAATTCTAAGTATAATGACTGCGACACGCTGTTTAATCACTGCAATTTGGTTCATCATTTCGATTTTCATGGCATTAGAAAGGCTCTGGGTTTAGATTTTTATGGGTCCTTCAAAATCATCAACTACATTCGATCTCAGGTAGCAAAAAATAGGTGTTGGAGCTGTGGTCTCTTGTGTCAATCAAACCAGGACTTGCAGAACCATTTACACAAAACACTGAATATCAAAGACATCGAGCTTCTTTGGGATGATGAGAAATATCTGAAACCCTTTAGGCAAGATGATTCGCTCCTGTACAGTTTTGCCAATGATGAAGAAGAAGATGATGATATTTCACTTAGCAACAATAATATTACAAGGCATATTGGAGGTAATTGCAATGATGCACAAATATTTAAAGAAAGTTCTCCATTTAACCCCAACCAGAAGAAGGAAAATGGTAGGGAAGGTTGTACTTCTACTTCACATAGTAATTTGAATGTGGAAAGCTTCTTAGAGACCGTGATGGAGAATGCCATGGAAACCACAGAGAATTTGGAACTGGAAGAAGATCAATTAAAATTTCCCAGTCAAAATTATTCTTCAAAGGAGATAAAAAAGGCAAATGAAAACTACTTTGGGGCGTATAGTTCTTTTGGCATACACAGAGAGATGATAAGTGATAAGGTCAGAACCGAAGCTTACATGCAAACAATTTTACATAATCCATCTCTCCTAAACAATGCAGTTGTGATGGACGTGGGTTGTGGAACTGGCATACTAAGTCTCTTTGCTGCAAAAGCGGGTGCATCCAGAGTTATTGCAGTTGAAGCAAGTGATAAAATGGCAGCAGTGGCCACTCAAATTGCAAAAGAAAATGATCTTTGGAGGAATAGGGAACAAACTGGAGATGGTAGCGGGACTAGTGGGATTATGGAAGTAGTTCATGGTATGGTAGAAGAACTTGAAAAAAACATAAATATTCAGCCTTCTAGTGTTGATGTATTATTGAGTGAATGGATGGGCTATTGCCTATTGTACGAGTCAATGCTCAGCTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCGGGAGGTGCAATCTTACCAGATACTGCAACAATTCTTGTTGCAGGATTTGGAATTGGTGGAACAAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGAAAGGAACTTGTTAAAGATGCTGCACAAACTCCCATTGTTGACATTGTGGATTCTAAGGATTTAGTAACCAGTGCTGCAATTCTTCATACATTTGATTTAGCAACTATGCATCCTGATGAAGTAGACTTCACAGCAAGCACTGAGTTGGAACCGATTCTACATTGTCCTGCAGACAAATCCGATACTTCTGAATCTGAGTCATCTTGGTGTTATGGAGTTGTCTTGTGGTTTGAAACTGGTTTTACCAGCAGATTCTGCAAAGAATCACCAACTGTTCTGTCCACATCCCCATACACTCCCAAAACCCACTGGTCTCAGACCATATTAACCTTCAGGGAACCAATTGCTATAGCATCTGGAAAATCTGGCACAGATAAGTCAGCAGCAGTAGGAACTGATGCCTGCCCTGCTGTCAAAATTCATTTGCGCATTAGCATTGTCCGTGCATCTCAACATCGAAGCATCGACATTTCGCTGGAAACTACTGGGATTGCCGGTGATGGTAGGAAGCACCACTGGCCTGTACAACTTTTTTCCCTAAGATAG | 1899 | 40.55 | MDQYPKNLDEETHNPEKTVREEEDDDEQEEGLDDWDDWNEDEEEGYLDSSFSCLFCNSKYNDCDTLFNHCNLVHHFDFHGIRKALGLDFYGSFKIINYIRSQVAKNRCWSCGLLCQSNQDLQNHLHKTLNIKDIELLWDDEKYLKPFRQDDSLLYSFANDEEEDDDISLSNNNITRHIGGNCNDAQIFKESSPFNPNQKKENGREGCTSTSHSNLNVESFLETVMENAMETTENLELEEDQLKFPSQNYSSKEIKKANENYFGAYSSFGIHREMISDKVRTEAYMQTILHNPSLLNNAVVMDVGCGTGILSLFAAKAGASRVIAVEASDKMAAVATQIAKENDLWRNREQTGDGSGTSGIMEVVHGMVEELEKNINIQPSSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGIGGTSLPFWENVYGFSMSCVGKELVKDAAQTPIVDIVDSKDLVTSAAILHTFDLATMHPDEVDFTASTELEPILHCPADKSDTSESESSWCYGVVLWFETGFTSRFCKESPTVLSTSPYTPKTHWSQTILTFREPIAIASGKSGTDKSAAVGTDACPAVKIHLRISIVRASQHRSIDISLETTGIAGDGRKHHWPVQLFSLR | 632 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 55063263 | 55068014 | - | evm.model.ptg000006l.711 | HCH1g0614 | 538633 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH1g0614 | 632 | FunFam | Protein arginine N-methyltransferase 6 | 254 | 419 | - | - | |
HCH1g0614 | 632 | Pfam | C2H2 type zinc-finger (2 copies) | 53 | 127 | IPR041661 | - | |
HCH1g0614 | 632 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
HCH1g0614 | 632 | MobiDBLite | consensus disorder prediction | 21 | 38 | - | - | |
HCH1g0614 | 632 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
HCH1g0614 | 632 | Coils | Coil | 221 | 241 | - | - | |
HCH1g0614 | 632 | Gene3D | Vaccinia Virus protein VP39 | 249 | 419 | IPR029063 | - | |
HCH1g0614 | 632 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 258 | 611 | IPR025799 | GO:0016274(InterPro)|GO:0018216(InterPro) | |
HCH1g0614 | 632 | SUPERFAMILY | beta-beta-alpha zinc fingers | 33 | 172 | IPR036236 | - | |
HCH1g0614 | 632 | Pfam | Arginine methyltransferase oligomerization subdomain | 422 | 572 | - | - | |
HCH1g0614 | 632 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 229 | 613 | IPR025799 | GO:0005634(PANTHER)|GO:0016274(InterPro)|GO:0018216(InterPro) | |
HCH1g0614 | 632 | Gene3D | - | 424 | 623 | - | - | |
HCH1g0614 | 632 | CDD | AdoMet_MTases | 300 | 418 | - | - | |
HCH1g0614 | 632 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 265 | 572 | IPR029063 | - | |
HCH1g0614 | 632 | Pfam | Methyltransferase domain | 302 | 417 | IPR013216 | GO:0008757(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g0614 | HCH-Chr1:55063263 | HCH8g0668 | HCH-Chr8:43418171 | 7.30E-55 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH1g0614 | K11436 | - | csv:101215999 | 914.45 |