Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0661 ATGTCAGGACTAGAAAAAGAACGTACGTTGGAAGAAACTCCAACGTGGGCTGTTGCTGTTGTTTGCTTTGTGTTGGTTGTTATATCAATCTTCATTGAACACATCATTCACCTCATAGAAAAGTGGCTGGAGAAAAGGCACAAGGCAGCTCTTGTTGAAGCACTAGAAAAAGTTAAAGCAGAGCTTATGCTGTTGGGATTCATATCCCTACTTCTAACAATAGGCCAAGATGCTGTTGTTCAAATGTGTATTTCCAAGAAAGTTGCAGCTACTTGGCATCCTTGTGGAGAGAAAGCAAAATCAACTTCCAAGAACAGCCGTCTAAAGCTTCTTGAATTTTCAGATTCTGAATTTGGTTCAAGGCGTATATTAGCCACAAAAGGAGATGATCAATGCTCTGCCAAGGGTCAAGTAGCCTTTGTGTCAGCATATGGGATCCACCAGCTCCATATTTTCATTTTTGTATTAGCTCTTTTCCATGTCCTTTACTGCATCACCACTTTGGCTTTAGGCAGAACAAAGATGAATAGATGGAAGTACTGGGAGGATGAGACAAAGACAATTGAATACCAGTACTATAATGATCCTGCAAGGTTTAGATTTGCGAGAGATACGACGTTTGGACGCCGACACTTGAGCTTTTGGAGTCGGTCACCAGTTTCCCTCTGGATAGTTTGTTTCTTCAGACAATTCTTTGGATCAGTTACCAAGGCTGATTACATGACACTCAGACATGGATTCATTGTTGCACATATGGCGCCCGGGAGCGAAGCAAAATTCGATTTCCATAAATACATTAGCAGATCTCTTGAAGAGGACTTTAAAGTTGTTGTTGGGATTAGTCCTGTGATGTGGCTATTTGCAGTTTTGTTCATTATGTCCAATACACATGGGTGGTTTTCATATCTATGGCTGCCTTTCATCTCTTTAATTATAATTCTGTTGGTGGGAACAAAGCTCCATGTTATCATAACAAAGATGGGGTTGACAATTCAAGAAAGGAGCCATGTTGTGAAGGGTGTCCCTGTTGTTGAACCTCGGGACGACCTCTTCTGGTTCGGACGTCCCCGTCTTATCCTCTTTTTGATTCATTTTGTTCTCTTTCAGAATGCATTTCAGCTTGCCTTCTTTGTTTGGAGCACATATGAATTCGGCTTGAGATCTTGCTTCCATCAGAAAATTGAAGATATTGCCATTAGACTCTCAATGGGGGTCATTATACAAGTTCTATGCAGTTATGTGACACTCCCACTCTATGCCCTGGTGACTCAGATGGGCACTAATATGAAACCGACCATTTTCAACGATCGAGTGGCGACGGCATTGAAGAATTGGCACCATTCCGCCAAGAAGAACACGAAGCACGGCAGACATTCAGAGAGCAACACACCATATTCAAGTAGGCCAGCTACTCCAACACGCGGCATGTCTCCCGTTCATCTCCTGCAGAATCATCACAGCAGCACATCTCCTAGAATATCTGATGCAGAACCTGACCGTTGGGACATCGAAGAGGTACCTCCTTCTTCGCGCCACAACGGAGCCCGTGATTCTCAAGAACATGATAGCTCTCATACAAGTAGAGAACAAGAGATGACAATGCAGCAACCAAGTTCAACCGAGCTCGTTCCCACGACACGTCCGGCTCGTACTCAACATGAAATCAATATCAGTTCCTCAGAGTTCTCATTTGGAAAATGA 1701 43.21 MSGLEKERTLEETPTWAVAVVCFVLVVISIFIEHIIHLIEKWLEKRHKAALVEALEKVKAELMLLGFISLLLTIGQDAVVQMCISKKVAATWHPCGEKAKSTSKNSRLKLLEFSDSEFGSRRILATKGDDQCSAKGQVAFVSAYGIHQLHIFIFVLALFHVLYCITTLALGRTKMNRWKYWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRSPVSLWIVCFFRQFFGSVTKADYMTLRHGFIVAHMAPGSEAKFDFHKYISRSLEEDFKVVVGISPVMWLFAVLFIMSNTHGWFSYLWLPFISLIIILLVGTKLHVIITKMGLTIQERSHVVKGVPVVEPRDDLFWFGRPRLILFLIHFVLFQNAFQLAFFVWSTYEFGLRSCFHQKIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGTNMKPTIFNDRVATALKNWHHSAKKNTKHGRHSESNTPYSSRPATPTRGMSPVHLLQNHHSSTSPRISDAEPDRWDIEEVPPSSRHNGARDSQEHDSSHTSREQEMTMQQPSSTELVPTTRPARTQHEINISSSEFSFGK 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55522966 55526615 + evm.model.ptg000006l.664 HCH1g0661 538680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0661 566 MobiDBLite consensus disorder prediction 446 566 - -
HCH1g0661 566 Pfam Mlo family 7 485 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH1g0661 566 MobiDBLite consensus disorder prediction 459 491 - -
HCH1g0661 566 PANTHER MLO-LIKE PROTEIN 1 4 530 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH1g0661 566 MobiDBLite consensus disorder prediction 529 566 - -
HCH1g0661 566 MobiDBLite consensus disorder prediction 492 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g1347 HCH-Chr13:41357086 HCH1g0661 HCH-Chr1:55522966 3.60E-84 dispersed
HCH1g0661 HCH-Chr1:55522966 HCH2g1166 HCH-Chr2:54237510 2.20E-196 dispersed
HCH1g0661 HCH-Chr1:55522966 HCH3g1261 HCH-Chr3:47585699 3.90E-201 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0661 K08472 - csv:101218929 897.886