Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0699 ATGGCCGTCGCCGCCGCCAACAAGAAATATTTCAACTATTCCGACATAAAAACCATCACCGTCCAAATCCTCACCGGGCGTTGGTTCATGATATTCGCCTCACTCCTAATCATGTCCGCCGCCGGCGCCACCTACATGTTCGCTCTTTACTCCAACGACATAAAATCCGTCCTCGGCTACGACCAAACAACCTTAAACTTACTAAGTTTCTTCAAAGATTTAGGAGCCAACGTCGGTGTTCTCTCAGGCCTCATCAATGAAGTAACCCCACCTTGGGTAGTTCTCTCCATAGGCGCAGTCCTGAATTTCTTCGGCTATTTCATGATTTGGCTTGCTGTTACGAAGAAAATATCGACTCCAAAAGTATGGCAGATGTGTCTTTATATTTGCATTGGTGCAAATTCTCAGTCTTTCGCTAACACCGGCTCTCTCGTTACATGTGTCAAGAATTTCCCAGAGAGCCGTGGTGTTGTTCTGGGAATTTTGAAAGGTTACGTGGGATTGAGCGGTGCGATTATAACTCAACTTTATCATGCTTTTTACGGCGATGATACCAAGTCTTTGATCTTGCTTATCGGCTGGCTTCCTGCTGCGATTTCTTTCGCGTTCTTGAGGACTATAAGGATTATGAAAGTGATTAGGCAGCCGAATGAGATTAAGGTTTTTTATAACTTTTTGTATATTTCTCTTGGGCTTGCTGGGTTTTTGATGATTATGATTGTTATTGAAAGTAAGGTTGTTTTTAGTCAGAGTGAATTTAGTGGGAGTGCTGCTGGGGTTATTTTTCTTCTTTTTCTTCCTTTGGTGGTTGTTTTTTTGGAAGAATATAATCTTTGGAACCTCAAGAATGCTAAATTCCACAACCCTTCTCCTCCTCTTCAAATCATTACTCAAAAACCCGAACCTACCCCGATCCCGACCTCGACCCCGAACCCGAAACCGGATTTGAATCAAGACCCAATTGAGGAAAAGCAAAGATCTTGTTGGAAAACAATGTTTAATCCACCACCAAGAGGAGAGGATTACACAATTCTTCAAGCACTTTTCAGTGTAGATATGATGATATTGTTTTTTTCAGCAATTTGTGGAGTTGGTGGGACTTTAACAGCAATTGACAATCTAGGCCAAATTGGGATTTCATTAGGGTATCCAAAAAGAAGCATAAGTACATTTATTACGTTAGTTAGCATATGGAATTACCTCGGACGTGTAGTGTCCGGTTTTGGATCAGAAATTGTGTTAACAAAATACAAATTCCCACGTCCTCTCATGCTCACTCTAACCCTACTCCTCTCCTGCGCCGGCCACCTTTTGATCTCTTTCGCCGTCCCTAACGGTCTTTACTTAGCCTCGATCCTCATCGGCTTCTGCTTCGGAGCGCAATGGCCGTTACTTTTCGCCATTATATCAGAGCTTTTCGGCCTAAAATACTACTCCACTCTTTACAATTTTGGATCCGTTGCTAGCCCTATTGGATTGTATATTTTGAACGTGAAAATTGCTGGGAATTTGTATGATAGAGAGGCAGAGAAGCAGCTTAGTGTCAGCGGGTTGGTTAGGAAACATGGGGAGGAGTTGAAGTGCGTTGGAAATCATTGTTTTAAAAAGTCGTTTTTGGTGATTACGGCTGTGACATTGCTTGGAGTGTTTGTTTCTTTGATTCTTGTTATCAGGACAAGGAGTTTTTATAAAGGGGACATTTACAAGAGATTCCGGGAAGAAGCCGAAGCCGGAGATGAAGGCGGGACCGAGTTGGGGTCGAAGCCCACCGATAGAAATAACACCGTAGTCGTTAAAGGGTCGTTGTAG 1809 42.95 MAVAAANKKYFNYSDIKTITVQILTGRWFMIFASLLIMSAAGATYMFALYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKKISTPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYHAFYGDDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNEIKVFYNFLYISLGLAGFLMIMIVIESKVVFSQSEFSGSAAGVIFLLFLPLVVVFLEEYNLWNLKNAKFHNPSPPLQIITQKPEPTPIPTSTPNPKPDLNQDPIEEKQRSCWKTMFNPPPRGEDYTILQALFSVDMMILFFSAICGVGGTLTAIDNLGQIGISLGYPKRSISTFITLVSIWNYLGRVVSGFGSEIVLTKYKFPRPLMLTLTLLLSCAGHLLISFAVPNGLYLASILIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYILNVKIAGNLYDREAEKQLSVSGLVRKHGEELKCVGNHCFKKSFLVITAVTLLGVFVSLILVIRTRSFYKGDIYKRFREEAEAGDEGGTELGSKPTDRNNTVVVKGSL 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55838358 55840166 + evm.model.ptg000006l.626 HCH1g0699 538718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0699 602 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 572 - GO:0016020(PANTHER)
HCH1g0699 602 MobiDBLite consensus disorder prediction 579 602 - -
HCH1g0699 602 SUPERFAMILY MFS general substrate transporter 27 566 IPR036259 -
HCH1g0699 602 MobiDBLite consensus disorder prediction 297 320 - -
HCH1g0699 602 FunFam Nodulin family protein 344 565 - -
HCH1g0699 602 Pfam Nodulin-like 27 272 IPR010658 -
HCH1g0699 602 CDD MFS_Mch1p_like 26 549 - -
HCH1g0699 602 MobiDBLite consensus disorder prediction 587 602 - -
HCH1g0699 602 Gene3D MFS general substrate transporter like domains 221 560 IPR036259 -
HCH1g0699 602 MobiDBLite consensus disorder prediction 297 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0699 HCH-Chr1:55838358 HCH7g0823 HCH-Chr7:16794824 7.60E-195 dispersed
HCH1g0699 HCH-Chr1:55838358 HCH1g0700 HCH-Chr1:55855781 3.70E-218 tandem
HCH11g0829 HCH-Chr11:38907697 HCH1g0699 HCH-Chr1:55838358 6.70E-159 transposed
HCH1g0699 HCH-Chr1:55838358 HCH11g0306 HCH-Chr11:2818339 1.40E-201 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0699 - - - 0.0