Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0700 ATGGAGGCTTCTGCAACTTCTAACGGCGGTTTTCACGGCCGGTCATTGAATCCATTCAACATGAAGACATTCACCGTTCAATTAATCACCGGATCATGGTTCATTATATTCGGTTCCTTTCTCATCATGTCCATGGCCGGAATTCCCTACATGTTCGGTCTCTACTCCGGTACCTTAAAATCAGTCCTCGGCTACGACCAAACAACTCTGAACTTCATTAGTTTCTTCAAAGATGTGGGTACCACCGTCGGTGTCGTCGCCGGTTTAATCAACGAAGTAACACCGCCGTGGTCCATATTAGCCATGGGCGCAGTTCTCAACTTCTTTGGTTACTTCATGATATGGCTTTCTGTCACTGAAAAAATAGCCACCAAAGTTTGGCTCATGTGCCTTTACATCTGCGTCGGCGCCAACGCCACCACTTTTGCTAACACCGGCGCTCTCGTTACCTGCGTTAAGAATTATCCGGAAAAGCGCGGCATCGTGATCGGAATCTTGAAGGGTTATATCGGACTGAGTGGAGCTATTGTTACTCAGTTTTACCATGCCATTTATGGGGATGATGCTAAATCTTTGATTCTTCTTTTGGGTTGGCTTCCGGCAGCGGTGTCTTTCGTGTTTTTACCGACCGTTCGCCGGATGAAAGTCGAGCATCAGTCGAATGAGCTTCAAGTTTTCTATAATTTTTTGTATATATCGTTGGGACTGGCTGGATTTCTCATGGTTATGATTATATTGCAGCGGAAATTCTCTTTCAATCGCGGCGAGTACGGTGGAAGTGCGGCTATGGTCACATTTCTGCTGTTGCTTCCCCTGGCGATTGTACTTATGGAGGAGTATAGGCTTTGGAAGAGGTCGGTGGCAATGGTGGGGGAGGAGGGGGCGGTACCGGCGGTGAAAATAGTGTCGAATAGAGAAACACCACAGTCGAAAAGCACGACACCGATGTTTCTGTTACCTAAAACTACAAAAAATGATGAAAACCCTAAAGTTTTGTGGTGGAAAAACGTGTTCAGCCCGCCGCAGAGGGGCGATGACTGGACGATACTTCAAGCTCTCTTTAGTGTTGACATGTTGTTGTTGTTTCTAGCAACCGCTTGCGGCGTGGGTGGGACGTTAACGGCGATCGATAACCTAGGTCAAATCGGAGGGTCATTAGGGTATCCAAAAAAGAGTATAAGCACATTTGTGTCATTAGTAAGCATATGGAATTATCTAGGGCGTGTCATGGCTGGCTTTGTCTCTGAACATTTGCTTGTAAAATACAAATTCCCACGTCCCTTAATGTTCACCCTTGTCCTCCTCCTCTCTTGCCTCGGTCACCTCCTCATTGCCTTCAACCCATCCGGGGGACTCTACATCGCATCGATCCTCATAGGCTTTTGCTATGGTGCTCAATGGCCGTTGCTCTTCGCCATTATTTCCGAGATATACGGGCTCAAGTACTACGCGACACTATACAATTTTGGGTCGGTGGCGAGTCCGGTGGGGCTATATGTGTTGAATGTGAATGTGGCTGGCTATTTGTATGATAAGGAAGCTAAGGAGCAATTGGCTGCCTTGGGAAAGATAAGGAAGATTGGAGAGGAGCTGAATTGTAGTGGGACAGTTTGTTTTAAGCTGTCTTTTATTATAATTACGGCAGTGACTTTGTTTGGGATGTTGGTTTCTCTTGTTTTGGTTTGGAGGACTAGAAAGTTTTACAAGACTGATATTTACAAAAAATTTAGAGAGGAGGGAGATAATGATGAAGATCATGTGAATGGAAATGGTGTTGTTTCATTGGGGTCAATATCAAAACAAGAATTGAAACCATAG 1818 45.43 MEASATSNGGFHGRSLNPFNMKTFTVQLITGSWFIIFGSFLIMSMAGIPYMFGLYSGTLKSVLGYDQTTLNFISFFKDVGTTVGVVAGLINEVTPPWSILAMGAVLNFFGYFMIWLSVTEKIATKVWLMCLYICVGANATTFANTGALVTCVKNYPEKRGIVIGILKGYIGLSGAIVTQFYHAIYGDDAKSLILLLGWLPAAVSFVFLPTVRRMKVEHQSNELQVFYNFLYISLGLAGFLMVMIILQRKFSFNRGEYGGSAAMVTFLLLLPLAIVLMEEYRLWKRSVAMVGEEGAVPAVKIVSNRETPQSKSTTPMFLLPKTTKNDENPKVLWWKNVFSPPQRGDDWTILQALFSVDMLLLFLATACGVGGTLTAIDNLGQIGGSLGYPKKSISTFVSLVSIWNYLGRVMAGFVSEHLLVKYKFPRPLMFTLVLLLSCLGHLLIAFNPSGGLYIASILIGFCYGAQWPLLFAIISEIYGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKEQLAALGKIRKIGEELNCSGTVCFKLSFIIITAVTLFGMLVSLVLVWRTRKFYKTDIYKKFREEGDNDEDHVNGNGVVSLGSISKQELKP 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55855781 55857598 + evm.model.ptg000006l.625 HCH1g0700 538719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0700 605 Gene3D MFS general substrate transporter like domains 347 570 IPR036259 -
HCH1g0700 605 SUPERFAMILY MFS general substrate transporter 29 214 IPR036259 -
HCH1g0700 605 FunFam Nodulin family protein 349 570 - -
HCH1g0700 605 SUPERFAMILY MFS general substrate transporter 235 567 IPR036259 -
HCH1g0700 605 Pfam Major Facilitator Superfamily 362 567 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
HCH1g0700 605 CDD MFS_Mch1p_like 33 554 - -
HCH1g0700 605 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 31 577 - GO:0016020(PANTHER)
HCH1g0700 605 Pfam Nodulin-like 33 275 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0700 HCH-Chr1:55855781 HCH7g0823 HCH-Chr7:16794824 9.70E-190 dispersed
HCH1g0699 HCH-Chr1:55838358 HCH1g0700 HCH-Chr1:55855781 3.70E-218 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0700 - - - 0.0