Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH1g0727 | ATGGCGTCTTTTTCCTTCTCTTCCTCTTCCTTCTCCTCTTACTACCACCTCATTTCTACTCTCATACCCTTCTTCCTCTCCGCCTTCATCTTTTTCCTCACTAAAAAAACCAAAACGAACCGCCTAAAACTCCCCCCCGGACCGCCCGGATGGCCCATCTTCGGAAACCTCTTCCAAATCGCTCGTTCTAAAAAACCCTTCTTCGAATATCTCGAAGAACAAAGACAAATTTACGGTCCAATCCTTACTCTCAAAATGGGTTCGAAAAATATGATCGTTTTAAGCGACGCGGAGCTGATTCATGAAGCTTTAGTAAAAAAAGGAACGACCTTTGCTAATCGGCCGCCGGATAACCCGACGAGAATCATATTTAGTAGCAATAAATTCTCAGTCAATGCGGCGGTGTACGGCCCTTTGTGGCGGTCCCTCCGCCGTAACATGGTGGAGAATATGCTTAGCTCAAGTAGATTGAAAGAGTTTCGTGGTGTACGAGAAAACGCCATGGATAAATTCATTAAACGAATTAGCGTTGAAGCTGAGGCTAATAACGGCGTCGTTTTGGTTTTGAGAAACGCGCGTTTTGCGTTTTTTTGTATTCTTTTAACGATGTGTTTTGGTTTTGAAATGGAGGAAGAAACGGTGAATAAAATGGACGAGTTGCTAAAAACCGTTTTGATTACTCTCGATCCTAGAATCGACGATTATCTCCCGATTTTAAGTCCGTTTTTCATCAAACAGAAACAAAAAGCTTTAGAAGTTCGAAAACGACAAATCGAATTCGTGGTTCAGTTAATAAACCGGCGGCGGAGGGCTTTGAAAAACCCGGAATCCGACATCGCCGCCACTTCGTTTTCATATCTCGACACACTGTTTGATCTTAAACTCGACGGCGGCTCCCAGCCGAAGGAGGAGGAATTAGTTACTCTTTGCTCTGAGTTTCTCAACGGCGGCACCGACACGACGGCGACAGCCGTCGAGTGGGGGATTGGGGAATTGACCGCTAACCCTGAAATTCAAGAGAAACTTTTCAGAGAAATTAAAGATGTAGTCGGAGGAGAGAGAAAAGTTGACGAAAAAGACGTGGAGAAAATGCCTTATTTACAAGCTGTAGTAAAGGAGTTATTACGAAAACACCCTCCGACTTTTTTTGCTTTGACTCATGCAGTGACGGAGCCAGCGAAGCTGGCGGGTTACGATATCCCGAGAGATGCGAATATGGAGCTTTTCTTGCCGGCTATTGGAAGAGATCCAAAGATTTGGAAGAATCCAGAGAAGTTTGATCCAGAGAGATTCTTTTCTAAAGAAGAAGAAGCTGATATTACAGGGGCAAGATGTGTAAAAATGATGCCGTTTGGCGTCGGGAGAAGGATTTGTCCAGGATTGGGAATGGCTACGATTCATGTTCATTTAATGCTTGCGAGAATGGTGCAAGAATTTCAATGGAGTGAGTTTTCGAAGGTGGATTTTTCATGGAAAATGGAGTTCACTATCGTCATGAAGAATCCTCTCAAAGCTAGGATCAAACCTAGGGTTTGA | 1536 | 43.95 | MASFSFSSSSFSSYYHLISTLIPFFLSAFIFFLTKKTKTNRLKLPPGPPGWPIFGNLFQIARSKKPFFEYLEEQRQIYGPILTLKMGSKNMIVLSDAELIHEALVKKGTTFANRPPDNPTRIIFSSNKFSVNAAVYGPLWRSLRRNMVENMLSSSRLKEFRGVRENAMDKFIKRISVEAEANNGVVLVLRNARFAFFCILLTMCFGFEMEEETVNKMDELLKTVLITLDPRIDDYLPILSPFFIKQKQKALEVRKRQIEFVVQLINRRRRALKNPESDIAATSFSYLDTLFDLKLDGGSQPKEEELVTLCSEFLNGGTDTTATAVEWGIGELTANPEIQEKLFREIKDVVGGERKVDEKDVEKMPYLQAVVKELLRKHPPTFFALTHAVTEPAKLAGYDIPRDANMELFLPAIGRDPKIWKNPEKFDPERFFSKEEEADITGARCVKMMPFGVGRRICPGLGMATIHVHLMLARMVQEFQWSEFSKVDFSWKMEFTIVMKNPLKARIKPRV | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 56086021 | 56087556 | + | evm.model.ptg000006l.598 | HCH1g0727 | 538746 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH1g0727 | 511 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 27 | 510 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| HCH1g0727 | 511 | SUPERFAMILY | Cytochrome P450 | 45 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | Pfam | Cytochrome P450 | 45 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | CDD | CYP77_89 | 77 | 504 | - | - | |
| HCH1g0727 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH1g0727 | 511 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | FunFam | Cytochrome P450 family protein | 38 | 511 | - | - | |
| HCH1g0727 | 511 | Gene3D | Cytochrome P450 | 36 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 75 | 94 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 99 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0727 | 511 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0829 | HCH-Chr14:36200641 | HCH1g0727 | HCH-Chr1:56086021 | 3.50E-124 | dispersed | |
| HCH1g0727 | HCH-Chr1:56086021 | HCH2g0341 | HCH-Chr2:44460407 | 1.60E-97 | dispersed | |
| HCH1g0727 | HCH-Chr1:56086021 | HCH13g0340 | HCH-Chr13:2281347 | 3.30E-207 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH1g0727 | K21995 | - | mdm:103408446 | 749.199 |