Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH1g0733 | ATGGAACAGTATGAGAAGGTTGAGAAAATTGGAGAAGGAACTTATGGTGTGGTTTACAAGGCACGTGACCGTGTTACGAACGAGACTATTGCGTTGAAGAAGATCCGGTTGGAGCAGGAAGATGAGGGAGTGCCGAGCACGGCTATTCGTGAAATTTCACTCTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTACAAGATGTAGTGCATAGTGAAAAGCGTCTGTATCTCGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGATTCCTCTCCTGATTTTGCAAAGGATCCACGCCAAGTGAAAATGTTTCTTTACCAAATTCTACGTGGCATTGCTTATTGCCACTCTCATAGAGTTCTTCATCGAGATCTAAAACCCCAGAATTTGCTGATAGATCGCAGGACAAATGCCCTAAAGCTTGCTGATTTTGGATTGGCCAGAGCATTTGGTATCCCTGTTAGAACATTCACACATGAGGTGGTGACCCTTTGGTACAGAGCACCAGAAATCTTACTCGGTTCCCGACATTATTCCACTCCAGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTGAACCAGCGGCCATTATTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAAATATTTCGAGTTCTGGGAACTCCAACTGAAGACACGTGGCCTGGTGTGACTTCTTTGCCCGATTTTAAATCTGCTTTCCCCAGGTGGCCTTCCAAGGAACTGGCTTCTATAGTTCCAAATCTTGAATCAAGCGGCATCGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCACCAAAAGAGTTACAGCCAGGAGTGCTCTTGAGCATGAATACTTCAAAGATGTTGGAATTTCCGGTTGA | 885 | 44.07 | MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPTEDTWPGVTSLPDFKSAFPRWPSKELASIVPNLESSGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGISG | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56132964 | 56137768 | + | evm.model.ptg000006l.592 | HCH1g0733 | 538752 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH1g0733 | 294 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 123 | 135 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH1g0733 | 294 | Pfam | Protein kinase domain | 4 | 287 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH1g0733 | 294 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 84 | - | - | |
HCH1g0733 | 294 | PANTHER | CELL DIVISION PROTEIN KINASE | 3 | 287 | IPR050108 | GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)|GO:0051445(PANTHER) | |
HCH1g0733 | 294 | ProSiteProfiles | Protein kinase domain profile. | 4 | 287 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH1g0733 | 294 | SMART | serkin_6 | 4 | 287 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH1g0733 | 294 | CDD | STKc_CDK1_CdkB_like | 4 | 287 | - | - | |
HCH1g0733 | 294 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 290 | IPR011009 | - | |
HCH1g0733 | 294 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524(InterPro) | |
HCH1g0733 | 294 | FunFam | Cell division control protein 2 | 1 | 84 | - | - | |
HCH1g0733 | 294 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 292 | - | - | |
HCH1g0733 | 294 | FunFam | Cell division control protein 2 homolog | 86 | 292 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g0733 | HCH-Chr1:56132964 | HCH9g0868 | HCH-Chr9:6216658 | 3.90E-96 | dispersed | |
HCH1g0733 | HCH-Chr1:56132964 | HCH4g0096 | HCH-Chr4:516201 | 1.20E-76 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81284 | PF00069 | Pkinase | 4.70E-81 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH1g0733 | K02206 | - | csv:116405161 | 572.007 |