Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0751 ATGGCTTCTAGAGAAGGGAGGCGCCATCATAATCTTGTGCCACTAGCTGCTTTGATTAGTAAAGAGATGAGGAATGAGAAATTGGAGAAACCAACTTTAAGATATGGTAATGCAGCTCAGTCTAAGAAAGGGGAAGATTTTTTTCTCATGAAAACTGATTGTCAGCGAGTTCCTGGGAATCCTGCATCCACTTTTTCAGTATTTGCTATATTAGATGGGCACAATGGAAATGCTGCAGCGATTTACACGAGGGAACATTTATTGGGTCATGTCTTGGGAGCTATTCCCCGTGGCCTTGGGCAGGAGGAGTGGCTTCAAGCTTTACCTCGAGCATTGGTTGCTGGATTTGTCAAAACAGATAAGGAGTTTCAGAGTAGAGGTGAAACTTCTGGAACGACAGTTACATTTGTAATAATTGATGGGTGGACAGTGACAGTTGCATCAGTTGGAGATTCCCGTTGTATTTTAGATACTCAAGGTGGTGCGGTCTCTGCTTTGACAGTTGATCATAGACTAGAAGACAATGTTGATGAGAGGGAACGTGTGACTGCAAGTGGTGGCGAAATTGGAAGGTTAAGCATTGTTGGCGGTGCTGAGATTGGCCCCCTCCGATGTTGGCCAGGAGGTTTATGCCTTTCTCGGTCAATTGGAGACATGGATGTTGGAGAGTTTATAGTTCCTATTCCTTTTGTTAAACAAGTAAAGTTATCAAATGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCCCTATCATCAGATATGGCTGCAAAGGCTTGCCGTGGATTGCCAGCGGAGCTTGCTGCTAGGCAAGTTGTGAAGGAAGCTTTAAGGACAAGAGGGTTGAAAGATGATACAACATGCATAGTTGTCGACGTAATTCCTCCTGATAATTCTGAGCAGTCTTCTCCTCCAAAGAAACAAAGCATGCTGAAATCTCTATTATTCGGGAAAAAATCTCACGGTTCTTCCAAGAAGTTGTCAAAAAATCTATCAGCTATTGGTCTAGTGGAAGAGCTATTTGAAGAAGGCTCTGCCATGTTGGCTGAAAGACTTGGAACTGTCGAGTTGACTGGACATGCTACGCCTAGCCTATTCACTTGTGCTGTATGTCAAGTAGATCTTGCTCCCTGTGAGGGTATCTCTGTTCACGCTGGTTCGATCTTCTCCACCAGCTCAAAGCCATGGCAGGGGCCTTTCCTCTGTGCCGATTGTCGAAACAAGAAGGATGCAATGGAAGGAAAGCGTCCTAGCGGGGTGAGAGTGGCATAG 1281 45.12 MASREGRRHHNLVPLAALISKEMRNEKLEKPTLRYGNAAQSKKGEDFFLMKTDCQRVPGNPASTFSVFAILDGHNGNAAAIYTREHLLGHVLGAIPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTVTFVIIDGWTVTVASVGDSRCILDTQGGAVSALTVDHRLEDNVDERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPFVKQVKLSNAGGRLIIASDGIWDALSSDMAAKACRGLPAELAARQVVKEALRTRGLKDDTTCIVVDVIPPDNSEQSSPPKKQSMLKSLLFGKKSHGSSKKLSKNLSAIGLVEELFEEGSAMLAERLGTVELTGHATPSLFTCAVCQVDLAPCEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56323628 56326830 + evm.model.ptg000006l.456 HCH1g0751 538770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0751 426 PANTHER PROTEIN PHOSPHATASE 35 295 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
HCH1g0751 426 CDD PP2Cc 42 296 IPR001932 -
HCH1g0751 426 Gene3D - 35 304 IPR036457 -
HCH1g0751 426 SMART PP2C_SIG_2 29 296 IPR001932 -
HCH1g0751 426 SMART PP2C_4 30 294 IPR001932 -
HCH1g0751 426 SUPERFAMILY PP2C-like 40 296 IPR036457 -
HCH1g0751 426 Pfam Protein phosphatase 2C 57 281 IPR001932 -
HCH1g0751 426 ProSiteProfiles PPM-type phosphatase domain profile. 27 296 IPR001932 -
HCH1g0751 426 FunFam probable protein phosphatase 2C 5 34 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0751 HCH-Chr1:56323628 HCH8g0076 HCH-Chr8:3901235 4.40E-173 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0751 - - - 0.0