Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0792 ATGACTAGAAAAAGAATCCCTGCCATCAATCTAATCATGCAAGAAAACAGTCATGGCTTTGGCCTTGATAATCAACATCAAGTTCTGGTTGAGGAAATTGAAGGCCTCATTAGAGTTTATGAAAATGGTTATGTGGAAAGAACTCAAATAGTTCCTTGTGTTTCTAATGCACTGCCTCTAGAGCTTGGTGTTATTTCATGGGATGTAGTGGTGGATAAGTTAAACAATATTTGGGCTCGTTTCTATATTCCAAAACAGTGTCAAGAGAAGCTTCCTTTGCTTGTTTATTTCCATGGAGGTGGATTTTCTATTGGCTCTGCTGCTTGGAGTTGCTACCATGAGTTCTTGGCTAAATTGTCTGCAAAAGCAAACTGTTTAATCATGTCTGTGGATTACCGTTTAGCTCCAGAAAACCCTCTCCCTGCTCCTTATGAAGATGGATTAAAGACCCTTTCGTGGTTGAAACAAGTTGCTCTTGGTGGGGCTAGTAAGCAGAATTGGTGGTCAAGACATTGTGATTTCACCAAAATTTTCCTCGGCGGCGATAGCGCCGGCGGCAACATAGCCTTCAATGTAGCTGCAAGACTTGGTGGCAAAATGACTGCTTCAGGGGCTGTGGCCTTGAAGCCACTGGTGATCAAAGGTAATATTTTGATACAACCATTTTTTGGTGGGGAGTCGAGAACCAAGTCAGAGAAGTATATGGTCCTACCACCCCGATCGCCACTTACGATGGCAGTGTCCGATACGTATTGGCGGTTGGCGTTGCCGTGTGGGGCTAACCGTGATCACCCATGGTGCAACCCATGGGTGAAAGGGGTGTTTAAAGTGGAGGAGCGGAGGGTTTTGCCTAGTTTGATATGCATATCAGAAATGGATATATTGAAAGACAGGAACTTGGAGTTTTGTTCTGCTATGCATAGAGTTGGTAAGTTGATTAATTGTGTTGTTTATGAAGGAGTTGGTCATGCATTTCAGATTCTCAACAACTCTCAACTCTCACAGACCAGGACCCTTGAAATGATTTCTCATATCAAAGATTTCATCAGTTTGTAG 1056 42.99 MTRKRIPAINLIMQENSHGFGLDNQHQVLVEEIEGLIRVYENGYVERTQIVPCVSNALPLELGVISWDVVVDKLNNIWARFYIPKQCQEKLPLLVYFHGGGFSIGSAAWSCYHEFLAKLSAKANCLIMSVDYRLAPENPLPAPYEDGLKTLSWLKQVALGGASKQNWWSRHCDFTKIFLGGDSAGGNIAFNVAARLGGKMTASGAVALKPLVIKGNILIQPFFGGESRTKSEKYMVLPPRSPLTMAVSDTYWRLALPCGANRDHPWCNPWVKGVFKVEERRVLPSLICISEMDILKDRNLEFCSAMHRVGKLINCVVYEGVGHAFQILNNSQLSQTRTLEMISHIKDFISL 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56642405 56643460 - evm.model.ptg000006l.415 HCH1g0792 538811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0792 351 SUPERFAMILY alpha/beta-Hydrolases 29 349 IPR029058 -
HCH1g0792 351 Gene3D alpha/beta hydrolase 36 350 IPR029058 -
HCH1g0792 351 Pfam alpha/beta hydrolase fold 94 326 IPR013094 GO:0016787(InterPro)
HCH1g0792 351 PANTHER ARYLACETAMIDE DEACETYLASE 35 335 IPR050466 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0792 HCH-Chr1:56642405 HCH4g0179 HCH-Chr4:1030468 1.50E-46 dispersed
HCH1g0792 HCH-Chr1:56642405 HCH9g1192 HCH-Chr9:18599700 3.90E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0792 - - - 0.0