Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0812 ATGGCCACACCATTTCCTTCATTTTTTCCATATCTCTTCTTCGCCAGATTCTTTTCTCTTTTAGTTACTGTTCTGATCTTCATCTGGGCACTTGCTTTCAGTTCTAGCTTCCATCATCTATCCCCTTCCCGCCAAGATCACATCTTTGAAGTTCTTCATCCTTTATTCATGGTTGTTGGTTTCATTCTCATCAGTGGAGAAGCAATTTTGATTCATAAGTGGTTGCCTGGTTCGAGGAATTTGAAGAAATCTGTTCATTTGATTCTTCAAGGGCTGGCTTTGGTTTCTGGGATTATTGGAATTTGGACTAAGTTTCATATGCAACGTGGCTTTTTTGCTAATTTCCATAGTCTTCATTCTTTGATGGGTTTAATGGCTGTCACTTTGTTTGGAGCTCAGTGGATGATTGGTTTTCTGAGCTTCTGGCATTGGAGGGAGGTGAGGACGACAAGGGAAAGAGTCCTGCCATGGCACATCTTCGTTGGGTTGTACTCTTACGGTTTGGCAGTGCTAGCGGCAGAAACCGGGCTTCTTGAGAAGCTAACTTCCTTGCAAATAAAGAGGAATGTCCCTAAGAAGGGACCAGAATCCATGGTTGTTAACAGTCTAGGACTGAGCTTGGCTTTGCTTAGCGGAATTATAGTACTCACTGCTATTTCACCCAAATATCCCCCTTCCCTTCCCACCAAAACCAAACAGCCATTGTTCTCTGAATCAAAACTCTTGCCTTCTTAG 735 42.86 MATPFPSFFPYLFFARFFSLLVTVLIFIWALAFSSSFHHLSPSRQDHIFEVLHPLFMVVGFILISGEAILIHKWLPGSRNLKKSVHLILQGLALVSGIIGIWTKFHMQRGFFANFHSLHSLMGLMAVTLFGAQWMIGFLSFWHWREVRTTRERVLPWHIFVGLYSYGLAVLAAETGLLEKLTSLQIKRNVPKKGPESMVVNSLGLSLALLSGIIVLTAISPKYPPSLPTKTKQPLFSESKLLPS 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56790553 56792280 - evm.model.ptg000006l.395 HCH1g0812 538831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0812 244 FunFam Cytochrome b reductase 1 6 226 - -
HCH1g0812 244 PANTHER CYTOCHROME B561-RELATED 1 223 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
HCH1g0812 244 Gene3D - 2 224 - -
HCH1g0812 244 SMART 561_7 52 177 IPR006593 -
HCH1g0812 244 Pfam Eukaryotic cytochrome b561 52 182 IPR006593 -
HCH1g0812 244 ProSiteProfiles Cytochrome b561 domain profile. 14 219 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0812 HCH-Chr1:56790553 HCH5g0799 HCH-Chr5:6129590 3.60E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0812 K08360 - csv:101205948 366.696