Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0819 ATGTCGTCGTCCCAATTTCTACCAATTTCCCACCCGCCTTCTTCTTCTTCTTCTTCTTCTTCGAATTCAAATTCTATTATAATTGACATTATATCACTTAAAGAAGAAGAAGAAGAAGAAGATAATTCGATCTCTTTTAAGCCTCTTCTTCCTCCTACTTCTTCAAGTTTTACCAATTTGCATAAACACAAACGGAAACGTCTTAAAAATCCTAACTTTATTTATTCCATCTCCGGTGACGTGGAGGATCCTCATGTTCAGAGAGCTGAGAGGTTTTTATTAACTCGATTCGGTTTTAAACTTTTTAATTATATTGGGGTTGCCTGCAGATGGATATTAAGATTTCTCGCTCTTGGTTGTTATTCATTGTTACTTTTCCCGGGTTTCATTCAAGTTGGATACTATTATTTTTCATCCAGACAGATACGCAGAAGTATAGTTTATGGTGATAAACCAAGAAATAGGTTGGATCTTTATATACCAAAACATGGTGATGGGCCAAAACCAGTTGTTGCATTTATAACAGGTGGAGCATGGATTATTGGCAACAAGGCTTGGGGTTGCCTTCTAGGACAACAATTATCAGAAAGAGACGTCATTGTAGCTTGCATCGATTATAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTATGGATGCATCCCAGGGCATCTCTTTTGTCTGCAATAATATCAGGGACTTTGGAGGTGATCCAAACAGATTTTATATAATGGGTCAGTCAGCTGGCGCACACATAGCTGCTTGCACACTTTTGGAGCAAGCAATGAAAGAGGCTGGCAAAGAAGAGAGCATTTCATGGAGTGTATCCCAGATTAAAGCTTATCTTGGTTTGTCAGGAGGGTATAATTTGCTTAATCTGGTAGATTACTTCACCACTCGAGGTCTATACCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAAGAGTCCTTAAAAAGATTTTCACCTGAAGTGATGATCCTGGAACCCAACATGAGAGCTGCAGTCTCACTTCTTCCTCGCTTCATCTTATTTCATGGAACTGCAGATTATTCCATACCATCAGATTCTAGTAAAACTTTTGCTGAAACTCTACAGAGAGTTGGAGTAAAAGCTGAAACATTCTTCTATGGAGGAAAGACACATACAGATGTGTTTGTTCAGGATCCAATGAGGGGTGGTAAAGATCAGCTGTTTGAAGATCTAGTTGCCATCATTCATGCAGATGATGCAGAAGCTCTGGCTAAAGACGCAGTGGCGCCTCCGAGTCGACGCCTTGTACCTGAATTGTTGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1326 39.67 MSSSQFLPISHPPSSSSSSSSNSNSIIIDIISLKEEEEEEDNSISFKPLLPPTSSSFTNLHKHKRKRLKNPNFIYSISGDVEDPHVQRAERFLLTRFGFKLFNYIGVACRWILRFLALGCYSLLLFPGFIQVGYYYFSSRQIRRSIVYGDKPRNRLDLYIPKHGDGPKPVVAFITGGAWIIGNKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIMDASQGISFVCNNIRDFGGDPNRFYIMGQSAGAHIAACTLLEQAMKEAGKEESISWSVSQIKAYLGLSGGYNLLNLVDYFTTRGLYRSLFLSIMEGEESLKRFSPEVMILEPNMRAAVSLLPRFILFHGTADYSIPSDSSKTFAETLQRVGVKAETFFYGGKTHTDVFVQDPMRGGKDQLFEDLVAIIHADDAEALAKDAVAPPSRRLVPELLLMLARSVSPF 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56840627 56844584 - evm.model.ptg000006l.388 HCH1g0819 538838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0819 441 SUPERFAMILY alpha/beta-Hydrolases 122 405 IPR029058 -
HCH1g0819 441 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 137 390 - -
HCH1g0819 441 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 93 407 IPR050300 GO:0016298(PANTHER)
HCH1g0819 441 MobiDBLite consensus disorder prediction 1 23 - -
HCH1g0819 441 Pfam BD-FAE 156 365 IPR049492 -
HCH1g0819 441 Gene3D alpha/beta hydrolase 136 391 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0819 HCH-Chr1:56840627 HCH9g0356 HCH-Chr9:2211930 1.30E-138 dispersed
HCH1g0819 HCH-Chr1:56840627 HCH10g1224 HCH-Chr10:43470546 3.80E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0819 K15889 - csv:101206426 638.262