Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH1g0973 | ATGGCAGAGGAAGATTTGAGGCTTCTTGGCACATGGTCTAGTCCTTTTGCTCAACGAGTCAGAATTGCCTTCAATATTAAGTCTGTCAAATACGATTTTCTTGAGGAAATATTAGCATCCAAAAGCCAACTCCTTCTTGAATCAAACCCCGTTTACAAGAAAATCCCTGTTCTTATTCATAACCACAAACCCATTGCTGAATCATTGATCATTGTGGAATATATTGATGAGGTTTGGACTTCTGGTCCCTCCATCCTTCCCTCTGATCCTTATGATCGTGCCATTGCTCGCTTTTGGGCTGCTTACGTAGATGATAAGTTGTTCTCATCCATGAAAGGGCTTTTTGGTGCTCAAGAAGAGGAAGAGAAAAATGCATTTGCCAATCAAGTTTTTGAAGGGATTGCATTATTGGAGGAAGCTTTTTTGAAGCTAAGTCAAGGGAAGGCTTACTTTGGTGGAGACCAAATTGGATTTCTTGATATTTCTTTTGGATCCATGTTGAGTTGGCTTATTGTGATTGGAAAATACATTGGATTCAAATTGATTGATGAAACAAAAACTCCTGCCTTGGCCAAATGGGCTCAAGAATTCTCTGCAAATGGTGCTGTCAAAGATGTTATGCCAAATATTGAAAGGCTTTTTGAGTTTGGCAAGATTATTCAGGCCGAGTTGAGAGGAGAGACTTCCAAGTGA | 693 | 39.83 | MAEEDLRLLGTWSSPFAQRVRIAFNIKSVKYDFLEEILASKSQLLLESNPVYKKIPVLIHNHKPIAESLIIVEYIDEVWTSGPSILPSDPYDRAIARFWAAYVDDKLFSSMKGLFGAQEEEEKNAFANQVFEGIALLEEAFLKLSQGKAYFGGDQIGFLDISFGSMLSWLIVIGKYIGFKLIDETKTPALAKWAQEFSANGAVKDVMPNIERLFEFGKIIQAELRGETSK | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57884611 | 57885940 | - | evm.model.ptg000006l.234 | HCH1g0973 | 538992 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH1g0973 | 230 | SUPERFAMILY | GST C-terminal domain-like | 77 | 220 | IPR036282 | - | |
HCH1g0973 | 230 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 216 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
HCH1g0973 | 230 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
HCH1g0973 | 230 | CDD | GST_C_Tau | 90 | 216 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
HCH1g0973 | 230 | CDD | GST_N_Tau | 6 | 79 | - | - | |
HCH1g0973 | 230 | Gene3D | - | 86 | 228 | - | - | |
HCH1g0973 | 230 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 216 | IPR010987 | - | |
HCH1g0973 | 230 | SFLD | Main.3: Omega- and Tau-like | 2 | 225 | IPR045073 | - | |
HCH1g0973 | 230 | SFLD | Glutathione Transferase (cytosolic) | 2 | 225 | IPR040079 | - | |
HCH1g0973 | 230 | FunFam | Glutathione S-transferase U9 | 86 | 226 | - | - | |
HCH1g0973 | 230 | FunFam | Glutathione S-transferase GSTU6 | 1 | 86 | - | - | |
HCH1g0973 | 230 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 195 | - | - | |
HCH1g0973 | 230 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 77 | IPR004045 | - | |
HCH1g0973 | 230 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 83 | IPR004045 | - | |
HCH1g0973 | 230 | Gene3D | Glutaredoxin | 1 | 85 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g0973 | HCH-Chr1:57884611 | HCH7g1515 | HCH-Chr7:47693578 | 8.20E-49 | dispersed | |
HCH1g0972 | HCH-Chr1:57882099 | HCH1g0973 | HCH-Chr1:57884611 | 6.60E-99 | tandem | |
HCH1g0973 | HCH-Chr1:57884611 | HCH1g0974 | HCH-Chr1:57887803 | 9.00E-88 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH1g0973 | K00799 | - | vvi:100245065 | 290.426 |