Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0974 ATGGCTGAAGAAGATTTGAGGCTTATAGGTTCATGGCCTAGTCCCTTTGTTCAAAGAGTCAGAATTGCTTTGAATCTCAAATCTGTCTATTACGATTTTCTTGACCAGCCCATAATTGAACCCAAAAGCCAACTTCTTCTTGAATCAAACCCCGTTTACAAGAAAATCCCTGTTCTTCTTCATAACCACAAACCCATCATTGAATCACTGATTATTGTTCAATATATTGATGAGGTTTGGACTTCGTCTCCCTCCATCCTTCCTTCTCATCCTTATGATCGTGCCGTTGCTCGCTTTTGGGGTGCTTATGTTGATGACAAGATTTTCGCACCCATTCTTGAGCTTGTAAGTACTGAAGAAGAGGAAAAGAAAAAAACACTTATCGATCAATTGGCAGAAGGGATTGCAGTAATGGAGGAAACGTTTTCGAAGCTGAGCAAAGGAAAGGTTTTCTTCGGTGGAGACCAGATTAAGTTCGTTGATATTGCGTTTGGATCCGTACTGGGTTGGATCCAAGTGACTGAAAAATTCAATGGATTGAAATTGATCGACGAAAAGAAAACTCCTGGATTGGCAAAATGGGCTGAAAACTTCTCTGCAGATAGTGCAGTGAAAAATGTTACATGGGATATTGAAAAGCTTGTAGAGTTTGCCAAAATACTCCAGGCCAAGATCAGAGGTCAACTTTCCAAGTAA 696 40.23 MAEEDLRLIGSWPSPFVQRVRIALNLKSVYYDFLDQPIIEPKSQLLLESNPVYKKIPVLLHNHKPIIESLIIVQYIDEVWTSSPSILPSHPYDRAVARFWGAYVDDKIFAPILELVSTEEEEKKKTLIDQLAEGIAVMEETFSKLSKGKVFFGGDQIKFVDIAFGSVLGWIQVTEKFNGLKLIDEKKTPGLAKWAENFSADSAVKNVTWDIEKLVEFAKILQAKIRGQLSK 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57887803 57888958 - evm.model.ptg000006l.233 HCH1g0974 538993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0974 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
HCH1g0974 231 Gene3D - 87 228 - -
HCH1g0974 231 CDD GST_C_Tau 91 221 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
HCH1g0974 231 SUPERFAMILY GST C-terminal domain-like 86 220 IPR036282 -
HCH1g0974 231 Gene3D Glutaredoxin 1 86 - -
HCH1g0974 231 Pfam Glutathione S-transferase, N-terminal domain 9 78 IPR004045 -
HCH1g0974 231 CDD GST_N_Tau 6 80 - -
HCH1g0974 231 SFLD Main.3: Omega- and Tau-like 2 226 IPR045073 -
HCH1g0974 231 SFLD Main (cytGST) 2 226 - -
HCH1g0974 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
HCH1g0974 231 Pfam Glutathione S-transferase, C-terminal domain 116 200 IPR004046 -
HCH1g0974 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 219 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
HCH1g0974 231 FunFam Glutathione S-transferase U9 87 227 - -
HCH1g0974 231 FunFam Glutathione S-transferase GSTU6 1 87 - -
HCH1g0974 231 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0972 HCH-Chr1:57882099 HCH1g0974 HCH-Chr1:57887803 3.10E-88 dispersed
HCH1g0974 HCH-Chr1:57887803 HCH9g0726 HCH-Chr9:4844178 2.20E-41 dispersed
HCH1g0973 HCH-Chr1:57884611 HCH1g0974 HCH-Chr1:57887803 9.00E-88 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0974 K00799 - mdm:103451886 287.345