Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g1010 ATGGAGCTACATAATGAAATATGGAAAGTGGTGCCATTTGCAGTGATGGTGAGCATGGAGGGATGCACTATTGCCTTAACCATATTGGCTAAAACAGCCATTACATATGGAATGAATCCTTCTGTTTTTGTTGTCTATACAAATGGACTTGCTTCCTTAATCCTCCTTCCTTATTCCTTCATTTATCATTACAGAGACAGAACGGAACAATCACTATTTACCTTCCCTCTTCTCCTGCGTATCTTCCTCTTGGGATTTATCGGGATATGTCTCTCTCAGAACCTTGCATTTTTGGGCCTAGGCTACAGCTCTCCAATTGTTGTGTGCGCAATGGGTCTTCTCATTCCTGCCATTTCTTTCATACTTTCCATTATTCTTAGGAGGACAAAGATTAACTTGGGAAGCCCGAGCTTCATCATCAAGGTAGTCGGCACGGTAATATCAATCATTGGAGCGACGTCGGAGGAACTCTACCGAGGTCCGGTGGTACGAAAATTACATCGTCTATCAACTTCTTCACATTTACAGTTCCAACAGAAGCTTTTAGTCTTCACCTCCACCACAGATCACTGGGTTCTAGGTGGCCTTTCATTGGCAGCTGCTACTCTCTGTGTCTCAATATGGAACATTATTCAGTTGGGAGTTATAAAGCAATATCCACAAGTGATGAAAGTGGCTTCCTTTTATAGTTTAGTGGGTACATTTCTCTCAGCGATAGTAGCTTTGTTTGTAGTGGAGGACATGAATGCATGGAAAATAAAATCCAACTTTGATCTTATTCTCATTGTTGCAACAGCGATTTTTAGTGGGCTAATCAGGAGCCGAGTGCATATATGGTGCATGCAGATGAAAGGTCCCTTTTACGTGCCCATGTTCAAGCCTTTTGGCATTCTTTTTGCTACCTTTTTTGGTGCTACCTTCTTTGGAGACACTTTTCATTATGGAAGTGTGATGGCAGCATTTATATGTGGAATGGGTTATTACACAGTTATGTGGGGACAAATTAATGAAGAAGATGGAGGAGGCAAATACAATGATGTCAAGAGCAGCAGTGATTCCAACAAAGTGCCTCTTCTGCAAGATGATATTGAATCTAGAGTCTAA 1104 41.39 MELHNEIWKVVPFAVMVSMEGCTIALTILAKTAITYGMNPSVFVVYTNGLASLILLPYSFIYHYRDRTEQSLFTFPLLLRIFLLGFIGICLSQNLAFLGLGYSSPIVVCAMGLLIPAISFILSIILRRTKINLGSPSFIIKVVGTVISIIGATSEELYRGPVVRKLHRLSTSSHLQFQQKLLVFTSTTDHWVLGGLSLAAATLCVSIWNIIQLGVIKQYPQVMKVASFYSLVGTFLSAIVALFVVEDMNAWKIKSNFDLILIVATAIFSGLIRSRVHIWCMQMKGPFYVPMFKPFGILFATFFGATFFGDTFHYGSVMAAFICGMGYYTVMWGQINEEDGGGKYNDVKSSSDSNKVPLLQDDIESRV 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58122645 58124994 - evm.model.ptg000006l.197 HCH1g1010 539029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g1010 367 PANTHER WAT1-RELATED PROTEIN 14 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
HCH1g1010 367 Pfam EamA-like transporter family 25 149 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g1010 HCH-Chr1:58122645 HCH13g0801 HCH-Chr13:7738015 1.40E-53 wgd
HCH1g1010 HCH-Chr1:58122645 HCH9g0162 HCH-Chr9:968636 3.20E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g1010 - - - 0.0