Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH1g1015 | ATGGCAGCGAGATCCCCCACAAACTTCTTGGACCTGGCTTCTGGAGATTTACTGGATATTCCTCGTACACCTAGGTCCTTGCCTCGGGTAATGACTGTTCCTGGAATTATTTCTGAATTGGATGATTATGGCAGCAATGATGGAGATTCAGAGTCTTCATCTGTGTGTCGTGAGCGGAAGATTATAGTTGCAAATATGTTGCCCTTGCATGCTAAAAAGGATGGGGAATCTTCCAAATGGTGCTTCAGTTTAGACGAGGATTCACTTCTACTGCAGTTAAAGAATGGCTTTTCACCTGAGACAGAGGTTATATATGTGGGTTCCCTTAAGGTTGAAATCGACCCCAGTGATCAGGAAGAGGTTGCTCAGAAGTTGTTTGAAAATTTTCACTGTGTACCTACATTTCTGCCTTACGATCTCCAGAAAAGGTTTTATCTTGGGTTCTGCAAACAGCAGCTATGGCCCTTGTTCCATTACATGCTTCCCATGTGCCCAGAACATGGTGATCGCTTTGACCGTTTGCTTTGGCTAGCTTATGTTTCTGCAAATAAATTATTTGCTGACAAGGTTATGGAGGTTATCAACCCTGAGGAAGATTCTGTTTGGGTTCATGACTATCACTTAATGGTTCTTCCCACATTTTTGCGGAAGCGCTTTAATCGAGTTAAACTTGGATTTTTCCTACATAGCCCATTTCCGTCATCAGAAATCTATCGGACTTTACCAGTTCGAGATGAGATTCTCCGTGGTCTGTTAAACTGTGATTTAATTGGTTTTCATACATTTGATTATGCCCGCCATTTTCTATCATGCTGCAGCAGAATGTTGGGTCTGGATTATGAATCCAAGCGGGGACACATTGGACTAGATTATTTCGGCCGCACGGTATTTATCAAAATCTTGCCTGTTGGTATTCACATGGGTCGGCTGGAATCAGTGATGAACCTTCCATCTACATCTGCTAAAGTCAGAGAGATTAGACAACAATTCATGGGGAAGAAATTAATTCTTGGTATTGATGACATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTTGCTATTGAACAGCTTTTACGGCAACGCCCAGAGTTGCGAGGCAAAATAGTCTTGGTTCAAATAGTGAATCCTGCAAGGGGTTCAGGGAAAGATGTTCATGAAGCTCATAAGGAAGCCTACCTTGCAGCTGAAAGGATCAACAGAGTTTATGGTTCAACTGACTATAAACCAGTGATTTTGATTGATCGCCCCGTTCCTCGTTTTGAAAAGACTGCTTATTATGCTCTAGCAGAATGCTGCATAGTGAGTGCCGTAAGGGACGGTATGAATTTGGTTCCGTACAAGTATATTGTTTGCAGGCAAGGAACTCCGCATATGGATGAGGCCATGGGCTTAGAAGTTGGCTCTCCTCGGACAAGCATGCTTGTAGTGTCTGAGTTTATTGGTTGCTCGCCTTCTTTAAGTGGAGCCATCAGGGTTAACCCTTGGGACATTGATGCTGTTGCTGATTCCTTGGAACTGGCCATAACCATGCACGAGTCAGAGAAGTTGTTGCGGCATGAGAAGCACTATCGATATGTCAGTTCGCATGATATAGGGTATTGGTCTCGCAGTTTTATACAAGATTTAGACAGAGCATGTCAAGATCACTACACTAAGCGGTGCTGGGGAATTGGCTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACAATTGACCACATTGTCTCAGCATATAAAAGAACTCATAGGAGGGCGATATTTTTGGACTATGATGGCACAATTATTTCACAAAGCTCTATTATTAAGACACCAAGTCCAGAAGTTATATCTGTTTTGACTACCCTTTGCAATGACCCTTGTAACACTGTGTTTGTTGTTAGTGGGAGGGGGAGAAGTTCTTTGGGCGAGTGGTTTGCCTCCTGTGAAATGTTGGGGATTGCCGCTGAACATGGATACTTTATAAGGTGGGGTGGAACTTCAGATTGGGAGGTCAGTGCGTTGTCTTCTGATGTGGATTGGATTAAAATTGTAGAACCAGTGATGAGATTATATACTGAAGCAACCGATGGCTCGTGCATAGAAACTAAAGAGAGTGCTTTGGTCTGGCACCATCAAGATGCCGATTCTGATTTTGGATCCTGTCAGGCAAAAGAATTACTGGACCATCTAGAAAACGTACTTGCCAATGAACCAGTCGTGGTTAAAAGGGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAGAAGGTTCTTTCGAGAATGGTGGATGGTGGAAGCCCACCTGATTTTGTGATGTGCATTGGGGATGATAGATCAGATGAAGATATGTTCGAGAGCATATTAAGCACCGTCTCCAGTCCTTCACTGCCATCAGCTCCTGAAATTTTTGCCTGCACTGTTGGGCGAAAGCCAAGCAAGGCAAAGTTTTATCTTGACGATACTTCAGACGTCGTGAAATTGCTGCAAGGCCTCGCCTCTTCTTCACGTCCAAGACCTCGGCAACCCACACAAACCCGTGTTTCTTTCGAGAGTGTTGTTTGA | 2583 | 43.75 | MAARSPTNFLDLASGDLLDIPRTPRSLPRVMTVPGIISELDDYGSNDGDSESSSVCRERKIIVANMLPLHAKKDGESSKWCFSLDEDSLLLQLKNGFSPETEVIYVGSLKVEIDPSDQEEVAQKLFENFHCVPTFLPYDLQKRFYLGFCKQQLWPLFHYMLPMCPEHGDRFDRLLWLAYVSANKLFADKVMEVINPEEDSVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVMNLPSTSAKVREIRQQFMGKKLILGIDDMDIFKGISLKLLAIEQLLRQRPELRGKIVLVQIVNPARGSGKDVHEAHKEAYLAAERINRVYGSTDYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPHMDEAMGLEVGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADSLELAITMHESEKLLRHEKHYRYVSSHDIGYWSRSFIQDLDRACQDHYTKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFVVSGRGRSSLGEWFASCEMLGIAAEHGYFIRWGGTSDWEVSALSSDVDWIKIVEPVMRLYTEATDGSCIETKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDGGSPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQGLASSSRPRPRQPTQTRVSFESVV | 860 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 58160433 | 58163198 | - | evm.model.ptg000006l.192 | HCH1g1015 | 539034 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH1g1015 | 860 | Gene3D | Glycogen Phosphorylase B; | 312 | 528 | - | - | |
HCH1g1015 | 860 | MobiDBLite | consensus disorder prediction | 839 | 860 | - | - | |
HCH1g1015 | 860 | MobiDBLite | consensus disorder prediction | 841 | 860 | - | - | |
HCH1g1015 | 860 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 52 | 311 | - | - | |
HCH1g1015 | 860 | NCBIfam | HAD-IIB family hydrolase | 592 | 793 | IPR006379 | - | |
HCH1g1015 | 860 | Gene3D | Glycogen Phosphorylase B; | 52 | 311 | - | - | |
HCH1g1015 | 860 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 313 | 528 | - | - | |
HCH1g1015 | 860 | SUPERFAMILY | HAD-like | 591 | 838 | IPR036412 | - | |
HCH1g1015 | 860 | CDD | HAD_TPP | 592 | 833 | - | - | |
HCH1g1015 | 860 | Pfam | Trehalose-phosphatase | 594 | 829 | IPR003337 | GO:0005992(InterPro) | |
HCH1g1015 | 860 | Gene3D | - | 590 | 717 | IPR023214 | - | |
HCH1g1015 | 860 | Gene3D | - | 719 | 851 | IPR023214 | - | |
HCH1g1015 | 860 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 720 | 851 | - | - | |
HCH1g1015 | 860 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 548 | - | - | |
HCH1g1015 | 860 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 590 | 707 | - | - | |
HCH1g1015 | 860 | NCBIfam | trehalose-phosphatase | 589 | 838 | IPR003337 | GO:0005992(InterPro) | |
HCH1g1015 | 860 | Pfam | Glycosyltransferase family 20 | 59 | 544 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
HCH1g1015 | 860 | CDD | GT20_TPS | 59 | 543 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
HCH1g1015 | 860 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 24 | 840 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g1015 | HCH-Chr1:58160433 | HCH6g1128 | HCH-Chr6:45863708 | 0.00E+00 | dispersed | |
HCH1g1015 | HCH-Chr1:58160433 | HCH8g1373 | HCH-Chr8:48475020 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH1g1015 | K16055 | - | csv:101212688 | 1621.29 |