Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH1g1094 | ATGAAGAACTTTCTATTTCTAATGCCTCTAAATCAGCTACCATCATGGTGTAATCTTTTCCTTCTATTCTCTCTACTGATCTTCATCATCAAAAAGAAGAGAGAGACTGTGAGAAAGAATAAGGGTAATCTTCCACCAAGTCCTCCCAAGCTTCCTATCATTGGAAACTTCCACCAACTTGGTAAGCTTCCACACAGCTCTCTCCGGCGTCTCTCTCAGCTTTACGGTCCCGTCTTTCGCCTTCATCTCGGTCGCTTCGAAACCGTCATTATCTCGTCGGCTGACGCTGCACGAGCCCTCTTGAAGACTCATGATCTCCATAGCTGTAGTAGACCTTCAAAAGATAGTTCAAAGAAACTTACTTACAATTATCTTGATGTTGCATTTTCTCCTTATAATGAGTACTGGAGAGAGATGAGAAAGACTTGTGTTCTTGAGCTTTTCAGTATTAAGAGAGTGAAATCTTATCAATCCATTAGAGAAGAAGAAGTTGCTTCGATGCTCGATTCGATATCGACATCGGCATCGGTATCTCCTGCGGCTCCAATTGATCTTAGTGAGAAGTTTCTCGCTCTCACGGCGAGTATCATCTTCAGGATAGCGTTTGGGAAGAGATTTCAAGCGAATGATTTCGGTTATGAGAGATTTCATGAAGTTGTGAGTGAAGCTGAAGCCATGTTAGGGAGTTATAGTGCTTCTGAATATGTTAGAATTCCTGAGTTGATGGGGAAGATGATTGATAAGATTACAGGAAGACATGGAAGGCTTGAAAGAGTTTCTAAAGAGTTAAATAACTTATTTCAAGGAGTAATAGATGATCATCTTGATCCTGATAGAAAAAAACTAGAAGGTCAAGAAGATGATATTATTGATGTGCTTCTGGCAATAGAGAAGGAACAAGAAGAACTTGGAGCTGCTACCATGACCCATGAAAATATCAAGGCCATTCTTTTGAACATATTTCTAGGTGGAGTAGACACTGGTGCAATTACTCTAGTATGGGCAGTGGCAGAACTCGCTAAACATCCTAATTACATGCAAAAAGCACAACAAGAAATCAGAAACTTGATCAAAGACAAAGGAAAAGTAACAGAAAACGACACAGAGGAGCTTCCATACCTTAAAATGGTAATAAAAGAAACACTAAGATTACATCCACCAGCTCCACTTCTTCTTCCAAGAGAATCCATGTCTCATTTCAAGATCAATGGCTATGATATTTTTCCAAACACAGTGATTCAAGTCAATGCTTGGGCAATTGGAAGAGACCCCAAATACTGGAAAGATCCAGAGGAGTTTTTTCCTGACAGGTTTGCTGTTAGTTCCGTTGATTATAAAGGACAACATTTTGAGTTGTTGCCATTTGGTGGTGGTCGGAGAAGCTGTCCGGCGATATTCATGGCTGCGAAAACCGTGGAGTTGGCTCTGGCTAATCTTTTGTATTGTTTTGATTGGAAATTGCCAGAGGGAATGAAGGAGGAGGATTTGAATATGGAAGAGGCTACCGGTTTGAGTTTGACTGTTTTCAAGAAATTGCCTCTACAACTTGTGCCAGTCCCACCAGACCCTTCAAATTTCTTGGTCGGATGA | 1590 | 40.75 | MKNFLFLMPLNQLPSWCNLFLLFSLLIFIIKKKRETVRKNKGNLPPSPPKLPIIGNFHQLGKLPHSSLRRLSQLYGPVFRLHLGRFETVIISSADAARALLKTHDLHSCSRPSKDSSKKLTYNYLDVAFSPYNEYWREMRKTCVLELFSIKRVKSYQSIREEEVASMLDSISTSASVSPAAPIDLSEKFLALTASIIFRIAFGKRFQANDFGYERFHEVVSEAEAMLGSYSASEYVRIPELMGKMIDKITGRHGRLERVSKELNNLFQGVIDDHLDPDRKKLEGQEDDIIDVLLAIEKEQEELGAATMTHENIKAILLNIFLGGVDTGAITLVWAVAELAKHPNYMQKAQQEIRNLIKDKGKVTENDTEELPYLKMVIKETLRLHPPAPLLLPRESMSHFKINGYDIFPNTVIQVNAWAIGRDPKYWKDPEEFFPDRFAVSSVDYKGQHFELLPFGGGRRSCPAIFMAAKTVELALANLLYCFDWKLPEGMKEEDLNMEEATGLSLTVFKKLPLQLVPVPPDPSNFLVG | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 58619652 | 58621684 | + | evm.model.ptg000006l.113 | HCH1g1094 | 539113 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH1g1094 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH1g1094 | 529 | FunFam | Cytochrome P450 83B1 | 30 | 517 | - | - | |
| HCH1g1094 | 529 | PANTHER | CYTOCHROME P450 71B11-RELATED | 22 | 519 | IPR050193 | - | |
| HCH1g1094 | 529 | SUPERFAMILY | Cytochrome P450 | 45 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | Gene3D | Cytochrome P450 | 28 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | CDD | CYP71-like | 75 | 514 | - | - | |
| HCH1g1094 | 529 | Pfam | Cytochrome P450 | 45 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | Coils | Coil | 346 | 366 | - | - | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 332 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 312 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 416 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 375 | 393 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | E-class P450 group I signature | 192 | 210 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | P450 superfamily signature | 376 | 387 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g1094 | 529 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH1g1094 | HCH-Chr1:58619652 | HCH3g0384 | HCH-Chr3:2486947 | 6.80E-123 | dispersed | |
| HCH1g1093 | HCH-Chr1:58613469 | HCH1g1094 | HCH-Chr1:58619652 | 2.40E-137 | tandem |
Pathway information