Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g1094 ATGAAGAACTTTCTATTTCTAATGCCTCTAAATCAGCTACCATCATGGTGTAATCTTTTCCTTCTATTCTCTCTACTGATCTTCATCATCAAAAAGAAGAGAGAGACTGTGAGAAAGAATAAGGGTAATCTTCCACCAAGTCCTCCCAAGCTTCCTATCATTGGAAACTTCCACCAACTTGGTAAGCTTCCACACAGCTCTCTCCGGCGTCTCTCTCAGCTTTACGGTCCCGTCTTTCGCCTTCATCTCGGTCGCTTCGAAACCGTCATTATCTCGTCGGCTGACGCTGCACGAGCCCTCTTGAAGACTCATGATCTCCATAGCTGTAGTAGACCTTCAAAAGATAGTTCAAAGAAACTTACTTACAATTATCTTGATGTTGCATTTTCTCCTTATAATGAGTACTGGAGAGAGATGAGAAAGACTTGTGTTCTTGAGCTTTTCAGTATTAAGAGAGTGAAATCTTATCAATCCATTAGAGAAGAAGAAGTTGCTTCGATGCTCGATTCGATATCGACATCGGCATCGGTATCTCCTGCGGCTCCAATTGATCTTAGTGAGAAGTTTCTCGCTCTCACGGCGAGTATCATCTTCAGGATAGCGTTTGGGAAGAGATTTCAAGCGAATGATTTCGGTTATGAGAGATTTCATGAAGTTGTGAGTGAAGCTGAAGCCATGTTAGGGAGTTATAGTGCTTCTGAATATGTTAGAATTCCTGAGTTGATGGGGAAGATGATTGATAAGATTACAGGAAGACATGGAAGGCTTGAAAGAGTTTCTAAAGAGTTAAATAACTTATTTCAAGGAGTAATAGATGATCATCTTGATCCTGATAGAAAAAAACTAGAAGGTCAAGAAGATGATATTATTGATGTGCTTCTGGCAATAGAGAAGGAACAAGAAGAACTTGGAGCTGCTACCATGACCCATGAAAATATCAAGGCCATTCTTTTGAACATATTTCTAGGTGGAGTAGACACTGGTGCAATTACTCTAGTATGGGCAGTGGCAGAACTCGCTAAACATCCTAATTACATGCAAAAAGCACAACAAGAAATCAGAAACTTGATCAAAGACAAAGGAAAAGTAACAGAAAACGACACAGAGGAGCTTCCATACCTTAAAATGGTAATAAAAGAAACACTAAGATTACATCCACCAGCTCCACTTCTTCTTCCAAGAGAATCCATGTCTCATTTCAAGATCAATGGCTATGATATTTTTCCAAACACAGTGATTCAAGTCAATGCTTGGGCAATTGGAAGAGACCCCAAATACTGGAAAGATCCAGAGGAGTTTTTTCCTGACAGGTTTGCTGTTAGTTCCGTTGATTATAAAGGACAACATTTTGAGTTGTTGCCATTTGGTGGTGGTCGGAGAAGCTGTCCGGCGATATTCATGGCTGCGAAAACCGTGGAGTTGGCTCTGGCTAATCTTTTGTATTGTTTTGATTGGAAATTGCCAGAGGGAATGAAGGAGGAGGATTTGAATATGGAAGAGGCTACCGGTTTGAGTTTGACTGTTTTCAAGAAATTGCCTCTACAACTTGTGCCAGTCCCACCAGACCCTTCAAATTTCTTGGTCGGATGA 1590 40.75 MKNFLFLMPLNQLPSWCNLFLLFSLLIFIIKKKRETVRKNKGNLPPSPPKLPIIGNFHQLGKLPHSSLRRLSQLYGPVFRLHLGRFETVIISSADAARALLKTHDLHSCSRPSKDSSKKLTYNYLDVAFSPYNEYWREMRKTCVLELFSIKRVKSYQSIREEEVASMLDSISTSASVSPAAPIDLSEKFLALTASIIFRIAFGKRFQANDFGYERFHEVVSEAEAMLGSYSASEYVRIPELMGKMIDKITGRHGRLERVSKELNNLFQGVIDDHLDPDRKKLEGQEDDIIDVLLAIEKEQEELGAATMTHENIKAILLNIFLGGVDTGAITLVWAVAELAKHPNYMQKAQQEIRNLIKDKGKVTENDTEELPYLKMVIKETLRLHPPAPLLLPRESMSHFKINGYDIFPNTVIQVNAWAIGRDPKYWKDPEEFFPDRFAVSSVDYKGQHFELLPFGGGRRSCPAIFMAAKTVELALANLLYCFDWKLPEGMKEEDLNMEEATGLSLTVFKKLPLQLVPVPPDPSNFLVG 529
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 58619652 58621684 + evm.model.ptg000006l.113 HCH1g1094 539113
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH1g1094 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH1g1094 529 FunFam Cytochrome P450 83B1 30 517 - -
HCH1g1094 529 PANTHER CYTOCHROME P450 71B11-RELATED 22 519 IPR050193 -
HCH1g1094 529 SUPERFAMILY Cytochrome P450 45 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 Gene3D Cytochrome P450 28 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 CDD CYP71-like 75 514 - -
HCH1g1094 529 Pfam Cytochrome P450 45 503 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 Coils Coil 346 366 - -
HCH1g1094 529 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH1g1094 529 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g1094 HCH-Chr1:58619652 HCH3g0384 HCH-Chr3:2486947 6.80E-123 dispersed
HCH1g1093 HCH-Chr1:58613469 HCH1g1094 HCH-Chr1:58619652 2.40E-137 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g1094 - - - 0.0