Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH2g0005 | ATGGATGATCTTCTGGTTTATATTGCTCTCTCTCTATTCTCCCTCTTCCTTGCCGTGAGGTTTGTGCTGGGATCTCGCCGGAAGCAACCACCAAGCCCACCTTTTTGTCTTCCAATAATAGGCCATCTCCATCGCATCAAACACCCTATCCACCGTACACTTCAGAAGCTATCAGAGAAGTACGGACATGTCATCTCTCTCCGCTTTGGTTCACGTCTCGTTGTAGTTATATCTTCTCCTTCAGCTGTCCAAGAATGCTTCACAAAAAACGATATCATTCTTGCAAATCGTCCTCTCTTGAAATCTGGGAAGTATTTGGCATATAACCATACAAACATGGCGGTATCCCCTTACGGTGAACATTGGAGAAACCTTCGTCGTATCTCGACCGTCGAGATTTTCTCGGTAAACCGTCTAAATCTGTTTTCGGGAATCCGCCTGGATGAAGTCAAGAGTTTACTGCGTAAATTGTCAGGAAATTCGTTTGAGGAATCTTCAAGAGTGGAGCTTGGTTCGATGTTTTTAGATCTTACATCTAATATTGTGTTGAGAATGGTGGCAGGAAATAGGTATTCTGGAAACCGTGAGAGGCGATTTAGAGATATGGTAAAGGAGATTATGGTGAATGGTGGAACAGGGAATCCAGGGGACTTCATACCAATATGGAATTGGATAGATCCAACTGGTTTTGAGAAGAGGATAATGAAGCTTGGAAAGAGATCTGATGAACTTCTTCAGGGATTAGTTGATGAAATTCGGAGTCAGAAAGGAGAAGAGGATTCAATGATTGACCATTTACTTCAATTTCAAAGTTTTGATGACCAAATTATCAAAGGCCTCATACAAGTTATATTTCTAGCCGGGATCGACACATCGGCTGTGACCTTGGAATGGGCACTATCTCATCTCCTCAACAACCCAGAGGTGTTGAGGAAAGCTAGAGCTGAGATTGACTCATTGATTGGACTAGAACGACTCGTCGAGGAAGCCGATTTGCCGAGTTTGAGTTATCTGCAAGGAATAATATCAGAGACGTTGAGGCTTAGCCCAGCAGCTCCCTTACTTGTGCCGCATTGTGCATCTGAGGACTGCAAAATACAAGGTTACGATATCCCACGTGAAACGATCATAATGATAAACGCATGGGCAATACATAGGGACCCAAATTTGTGGGAAGAAGCAGAGAGTTTTAAGCCTGAAAGACATGAAAATATGATGGATTCATACAAACTAATTCCATTTGGTTTGGGAAGGAGAGCTTGTCCTGGTGTGGGGATGGCACAGCGTGTTGTTGGATTGACTTTGGCATCATTGATTCAATGCTTTGAGTGGGAAAGAGTGGGAATTGAATTGATTGACATGGATGAAGGTGAAGGGCTTACTATGCCCAAAGCTCAACCCTTGGAAGCAATGTGTAAACCTCGCCCAATTATGATACATATTCTCGGAGAAGCAAACTGA | 1461 | 43.19 | MDDLLVYIALSLFSLFLAVRFVLGSRRKQPPSPPFCLPIIGHLHRIKHPIHRTLQKLSEKYGHVISLRFGSRLVVVISSPSAVQECFTKNDIILANRPLLKSGKYLAYNHTNMAVSPYGEHWRNLRRISTVEIFSVNRLNLFSGIRLDEVKSLLRKLSGNSFEESSRVELGSMFLDLTSNIVLRMVAGNRYSGNRERRFRDMVKEIMVNGGTGNPGDFIPIWNWIDPTGFEKRIMKLGKRSDELLQGLVDEIRSQKGEEDSMIDHLLQFQSFDDQIIKGLIQVIFLAGIDTSAVTLEWALSHLLNNPEVLRKARAEIDSLIGLERLVEEADLPSLSYLQGIISETLRLSPAAPLLVPHCASEDCKIQGYDIPRETIIMINAWAIHRDPNLWEEAESFKPERHENMMDSYKLIPFGLGRRACPGVGMAQRVVGLTLASLIQCFEWERVGIELIDMDEGEGLTMPKAQPLEAMCKPRPIMIHILGEAN | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 325628 | 327088 | + | evm.model.ptg000010l.1499 | HCH2g0005 | 539230 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH2g0005 | 486 | Pfam | Cytochrome P450 | 31 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 177 | 195 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 421 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 296 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 276 | 293 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 411 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | E-class P450 group I signature | 339 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH2g0005 | 486 | FunFam | Cytochrome P450 family protein | 23 | 478 | - | - | |
| HCH2g0005 | 486 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 475 | IPR050651 | - | |
| HCH2g0005 | 486 | CDD | CYP81 | 62 | 468 | - | - | |
| HCH2g0005 | 486 | SUPERFAMILY | Cytochrome P450 | 30 | 475 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | P450 superfamily signature | 287 | 304 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | PRINTS | P450 superfamily signature | 340 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0005 | 486 | Gene3D | Cytochrome P450 | 22 | 475 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0327 | HCH-Chr14:32019696 | HCH2g0005 | HCH-Chr2:325628 | 7.00E-170 | dispersed | |
| HCH2g0005 | HCH-Chr2:325628 | HCH2g0007 | HCH-Chr2:356082 | 4.00E-146 | dispersed | |
| HCH2g0005 | HCH-Chr2:325628 | HCH2g0006 | HCH-Chr2:334628 | 1.90E-284 | tandem | |
| HCH14g0322 | HCH-Chr14:31937862 | HCH2g0005 | HCH-Chr2:325628 | 1.70E-160 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH2g0005 | K13260 | - | csv:101205391 | 670.618 |