Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH2g0007 | ATGGACTTTCTCTTACTTCTTTGTCTTCTCCTTCTTCTCCCTGCTTTCTTGTTTCTTCATCAACAGCTTACAAACCGTCTCAAAAATCTTCCTCCAACCCCACCCTCTGTTCCCATCATCGGCCATCTCCATCTCCTTAAACGACCCACACACCGTACTTATCAAAAAATAGCAGCCAAATATGGTCCTATTTTCTCTTTAAGATTCGGATCTCGCCTTGCTGTTATTGTTTCATCACTCGATATAGCCGAAGAATGTTTCACCAAAAACGACATCGTTTTCGCCAACCGACCACCTCTCCTCATAGGAAAACACCTCGGCTACAACTACACGACAATGGCGACGTCACCTCACGGACAGCATTGGAGAAACCTACGACGACTTGCAGCCATGGAGATCTTTTCCACAGCTCGGCTTAACTCGTCTTTAAGTATACGAAAGGACGAGATCCGACGTTTGTTAAGAAAACTCCACGGCGGGGAAGGAGGAGGATCGAGGGAGGAGTTCCGCAAGGTTGAATTGAAAACGGTTCTTACGGAGCTGACGTTCAACGCGTTGTTGAGGACGGTGGCTGGGAAAAGGTATTACGGAGAAGTAGTTTCTGATAAGGATGAGGCGAGAGAGTTCAAAGAGATGATGTTACAGATTTCAGCTCACGGTGGAGCTTCGAATAGGGTTGATTTCTTTCCTTTTATGAAATGGATAGTTGGTGATGGCTTTGAGAAGAGTTTGATGCGTTTGACAAAGAGGACTGATAAATTCATGCAGGCTCTGATTGAAGAACATCGTAATACTAATTTAGAAAAGAAGAAGACTCATTTTCTGATTGATCATCTTCTCGATTTGCAGCTTTCTGAACCAGAATATTATACGGATGAGATCATCAAAGGACTCATTCTGGTTTTGATCCTAGCCGGTACGGACTCATCTTCCGTCACCTTAGAATGGGCAATGACCCATCTCCTGAATAACCCCCATGTTTTAGAAAAAGCCAAAGCTGAGATAGATGAAAAAGTGGGTAAAGATCGGACCATGGAGGAATCTGACCTCCCAAACCTAACTTATTTAGAATCCATCATTTTGGAGACCCTCCGATTACACCCCGCTGCTCCATTACTCCTTCCCCATTATTCCTCGGATAAAAGTAAAGTTGGTGGGTATGATATTCCAGGTGGCACAATGTTGTTAGTGAATGTATGGGGGATTCATAGAGATCCAAAACTGTGGGAAGATCCGAGGAGGTTCAGGCCAGAGAGGTTTATAGAAGAAGCAGGGGGGTGGAAGAAAGTATTGAGTTTCGGAATGGGAAGGAGGGCTTGTCCAGGGGAAGGCATGGCACTTCGTTTCGTGGGATTGAGTTTGGGACAAATGATTCAATGTTATGAGTGGAAAAGGATTGGTGAAGAAGAGATTGATATGATTGAAGGCGGAGGAATTACGATTATAAAAGTGAATCCCTTGGAAGCAATGTGTAAGCCTCGCCCACTCATGGATATTGTTTTATCAAATCCTCTTCATCAAATTTAA | 1527 | 43.88 | MDFLLLLCLLLLLPAFLFLHQQLTNRLKNLPPTPPSVPIIGHLHLLKRPTHRTYQKIAAKYGPIFSLRFGSRLAVIVSSLDIAEECFTKNDIVFANRPPLLIGKHLGYNYTTMATSPHGQHWRNLRRLAAMEIFSTARLNSSLSIRKDEIRRLLRKLHGGEGGGSREEFRKVELKTVLTELTFNALLRTVAGKRYYGEVVSDKDEAREFKEMMLQISAHGGASNRVDFFPFMKWIVGDGFEKSLMRLTKRTDKFMQALIEEHRNTNLEKKKTHFLIDHLLDLQLSEPEYYTDEIIKGLILVLILAGTDSSSVTLEWAMTHLLNNPHVLEKAKAEIDEKVGKDRTMEESDLPNLTYLESIILETLRLHPAAPLLLPHYSSDKSKVGGYDIPGGTMLLVNVWGIHRDPKLWEDPRRFRPERFIEEAGGWKKVLSFGMGRRACPGEGMALRFVGLSLGQMIQCYEWKRIGEEEIDMIEGGGITIIKVNPLEAMCKPRPLMDIVLSNPLHQI | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 356082 | 357608 | + | evm.model.ptg000010l.1497 | HCH2g0007 | 539232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH2g0007 | 508 | CDD | CYP81 | 62 | 487 | - | - | |
| HCH2g0007 | 508 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | SUPERFAMILY | Cytochrome P450 | 31 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH2g0007 | 508 | Gene3D | Cytochrome P450 | 24 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | Pfam | Cytochrome P450 | 31 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PANTHER | CYTOCHROME P450 82C3-RELATED | 12 | 494 | IPR050651 | - | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0007 | 508 | FunFam | Cytochrome P450 family protein | 22 | 497 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0328 | HCH-Chr14:32025759 | HCH2g0007 | HCH-Chr2:356082 | 4.00E-149 | dispersed | |
| HCH2g0005 | HCH-Chr2:325628 | HCH2g0007 | HCH-Chr2:356082 | 4.00E-146 | dispersed | |
| HCH2g0007 | HCH-Chr2:356082 | HCH4g0603 | HCH-Chr4:3982635 | 2.70E-137 | dispersed | |
| HCH2g0006 | HCH-Chr2:334628 | HCH2g0007 | HCH-Chr2:356082 | 4.00E-146 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH2g0007 | K13260 | - | csv:101210967 | 592.038 |