Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0137 ATGGAAGTGGGATTTGTTAGAAAAGACAATACCTGGTGGGTTTTCACACTCCCATATCTGATAGATTCCACTCCCAATTCATTCCTTCTCCTTCTCTTTCTTCTCTTCACTTTCATCTCTATCGGAATCCTCACTTGGGCTTTCGCCACCGGTGGTGGCATTGCTTGGAAAAACAGAAGAAATCAAAGAGGCCGAGTTTCGATACCCGGCCCACGCGGCCTTCCATTTCTCGGAAGTCTCTTAACACTCAGCCACGGTTTACCTCACCGTACTCTAGCAAAATTAGCCCTTCACCGACACAACACTCAGTTAATGTGTTTCAGTCTCGGTTCCACTCCTGTCGTTGTCTCTTCCAACACCACAACCGCTAAGGAAATTCTAACCTCACCCCACTTCGCTGACCGTCCAATCAAACTCTCCGCTAAAAATCTAATGTTCAGCCGCGCCATCGGTTTCGCTCCTAACGGAACTTACTGGCGTCTTTTGAGAAGAATATCATCTTCCCATCTTTTCTCCCCTCGGCGTATTTTAGCCCATGAAGCTTCTCGTCAGGTAGAATGCGCCGCCATGATTCGTAACATAGAAAAGGAACAGAGTGCGAAAGGGAGTGTTGGGTTGAGAAATCATTTACAAACTGCGTCGTTGAATAATATAATGGGAAGTGTGTTTGGGAAAAGGTATGATAGAGAGAGAAACAGAGAGGAAATGGAAGAGGTATGGGGTTTGGTTAGGGAAGGGTTTGAGTTATTGGGAGCGTTTAATTGGTCTGATTATCTCCCGTGGTTGAGTTATTTATATGACCCGTGTCGTGTAAATGAACGTTGTGAGAAACTGGTTCCTCGAGTTAAAGAATTTGTGAGAGGGATTATTAATCAACACCGTTTATCTCGCGGTTCCTCCGGAGATTTCTCGGATCATTCTGATTTCGTTGATGTCTTGCTTTCTCTTGATGGTGATGAAAAGCTTTCTGAAGATGATATGATTGCTGTTTTATGGGAGATGATATTTAGGGGGACTGATACGACGGCGTTGCTGACGGAATGGGTGATGGCGGAGTTGGTTTTAAACCAAGAGATACAAGACGAACTTCATAAAGAAATCGACGGCGCTGTGGGCATGGGTGACGGAAGAGCTTTGACAGATGCTGACGTAGTCAAGCTGCCGTACTTACAGGCGGTGGTGAAGGAAACTTTGCGTCTCCATCCACCGGGCCCACTACTGTCGTGGGCTCGTCTTTCTTCGTCGGATGTCCAGCTCAGCAACGGAATGCTTATCCCGGAGAATACAACCGCCATGGTGAATATGTGGGCCATAACGCATGACCCGCACGTGTGGGAGGACCCACACGAGTTTAAACCCGAGAGATTCTTGGTTGCTGACGTGGACATCAGGGGTAGTGATTTGAGGCTTGCTCCGTTTGGGGCTGGGCGCCGGGTTTGTCCCGGAAAAAACCTTGGGCTTGTGACTGTCACATTATGGGTCGCTAAACTGGTCCATCATTTCAAGTGGGCCCCAGATGTGTCCCATTCTGTGGATCTGACTGAATTGCTGAAGCTGTCTTGTGAAATGAAGAATCCCCTTTATGCAGTCGCAATGAGAAGACGTGGACTTTAG 1614 47.4 MEVGFVRKDNTWWVFTLPYLIDSTPNSFLLLLFLLFTFISIGILTWAFATGGGIAWKNRRNQRGRVSIPGPRGLPFLGSLLTLSHGLPHRTLAKLALHRHNTQLMCFSLGSTPVVVSSNTTTAKEILTSPHFADRPIKLSAKNLMFSRAIGFAPNGTYWRLLRRISSSHLFSPRRILAHEASRQVECAAMIRNIEKEQSAKGSVGLRNHLQTASLNNIMGSVFGKRYDRERNREEMEEVWGLVREGFELLGAFNWSDYLPWLSYLYDPCRVNERCEKLVPRVKEFVRGIINQHRLSRGSSGDFSDHSDFVDVLLSLDGDEKLSEDDMIAVLWEMIFRGTDTTALLTEWVMAELVLNQEIQDELHKEIDGAVGMGDGRALTDADVVKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWEDPHEFKPERFLVADVDIRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDVSHSVDLTELLKLSCEMKNPLYAVAMRRRGL 537
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 9640380 9642330 - evm.model.ptg000010l.1367 HCH2g0137 539362
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0137 537 SUPERFAMILY Cytochrome P450 68 534 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 FunFam Cytochrome P450 78A5 60 534 - -
HCH2g0137 537 Pfam Cytochrome P450 69 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 CDD CYP78 100 527 - -
HCH2g0137 537 PANTHER CYTOCHROME P450 78A7-RELATED 7 529 IPR051996 -
HCH2g0137 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0137 537 Gene3D Cytochrome P450 53 534 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0137 HCH-Chr2:9640380 HCH3g0127 HCH-Chr3:811990 3.30E-133 dispersed
HCH2g0137 HCH-Chr2:9640380 HCH4g0157 HCH-Chr4:876781 3.00E-134 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0137 K20619 - vvi:100257640 757.288