Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH2g0137 | ATGGAAGTGGGATTTGTTAGAAAAGACAATACCTGGTGGGTTTTCACACTCCCATATCTGATAGATTCCACTCCCAATTCATTCCTTCTCCTTCTCTTTCTTCTCTTCACTTTCATCTCTATCGGAATCCTCACTTGGGCTTTCGCCACCGGTGGTGGCATTGCTTGGAAAAACAGAAGAAATCAAAGAGGCCGAGTTTCGATACCCGGCCCACGCGGCCTTCCATTTCTCGGAAGTCTCTTAACACTCAGCCACGGTTTACCTCACCGTACTCTAGCAAAATTAGCCCTTCACCGACACAACACTCAGTTAATGTGTTTCAGTCTCGGTTCCACTCCTGTCGTTGTCTCTTCCAACACCACAACCGCTAAGGAAATTCTAACCTCACCCCACTTCGCTGACCGTCCAATCAAACTCTCCGCTAAAAATCTAATGTTCAGCCGCGCCATCGGTTTCGCTCCTAACGGAACTTACTGGCGTCTTTTGAGAAGAATATCATCTTCCCATCTTTTCTCCCCTCGGCGTATTTTAGCCCATGAAGCTTCTCGTCAGGTAGAATGCGCCGCCATGATTCGTAACATAGAAAAGGAACAGAGTGCGAAAGGGAGTGTTGGGTTGAGAAATCATTTACAAACTGCGTCGTTGAATAATATAATGGGAAGTGTGTTTGGGAAAAGGTATGATAGAGAGAGAAACAGAGAGGAAATGGAAGAGGTATGGGGTTTGGTTAGGGAAGGGTTTGAGTTATTGGGAGCGTTTAATTGGTCTGATTATCTCCCGTGGTTGAGTTATTTATATGACCCGTGTCGTGTAAATGAACGTTGTGAGAAACTGGTTCCTCGAGTTAAAGAATTTGTGAGAGGGATTATTAATCAACACCGTTTATCTCGCGGTTCCTCCGGAGATTTCTCGGATCATTCTGATTTCGTTGATGTCTTGCTTTCTCTTGATGGTGATGAAAAGCTTTCTGAAGATGATATGATTGCTGTTTTATGGGAGATGATATTTAGGGGGACTGATACGACGGCGTTGCTGACGGAATGGGTGATGGCGGAGTTGGTTTTAAACCAAGAGATACAAGACGAACTTCATAAAGAAATCGACGGCGCTGTGGGCATGGGTGACGGAAGAGCTTTGACAGATGCTGACGTAGTCAAGCTGCCGTACTTACAGGCGGTGGTGAAGGAAACTTTGCGTCTCCATCCACCGGGCCCACTACTGTCGTGGGCTCGTCTTTCTTCGTCGGATGTCCAGCTCAGCAACGGAATGCTTATCCCGGAGAATACAACCGCCATGGTGAATATGTGGGCCATAACGCATGACCCGCACGTGTGGGAGGACCCACACGAGTTTAAACCCGAGAGATTCTTGGTTGCTGACGTGGACATCAGGGGTAGTGATTTGAGGCTTGCTCCGTTTGGGGCTGGGCGCCGGGTTTGTCCCGGAAAAAACCTTGGGCTTGTGACTGTCACATTATGGGTCGCTAAACTGGTCCATCATTTCAAGTGGGCCCCAGATGTGTCCCATTCTGTGGATCTGACTGAATTGCTGAAGCTGTCTTGTGAAATGAAGAATCCCCTTTATGCAGTCGCAATGAGAAGACGTGGACTTTAG | 1614 | 47.4 | MEVGFVRKDNTWWVFTLPYLIDSTPNSFLLLLFLLFTFISIGILTWAFATGGGIAWKNRRNQRGRVSIPGPRGLPFLGSLLTLSHGLPHRTLAKLALHRHNTQLMCFSLGSTPVVVSSNTTTAKEILTSPHFADRPIKLSAKNLMFSRAIGFAPNGTYWRLLRRISSSHLFSPRRILAHEASRQVECAAMIRNIEKEQSAKGSVGLRNHLQTASLNNIMGSVFGKRYDRERNREEMEEVWGLVREGFELLGAFNWSDYLPWLSYLYDPCRVNERCEKLVPRVKEFVRGIINQHRLSRGSSGDFSDHSDFVDVLLSLDGDEKLSEDDMIAVLWEMIFRGTDTTALLTEWVMAELVLNQEIQDELHKEIDGAVGMGDGRALTDADVVKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWEDPHEFKPERFLVADVDIRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDVSHSVDLTELLKLSCEMKNPLYAVAMRRRGL | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 9640380 | 9642330 | - | evm.model.ptg000010l.1367 | HCH2g0137 | 539362 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH2g0137 | 537 | SUPERFAMILY | Cytochrome P450 | 68 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | FunFam | Cytochrome P450 78A5 | 60 | 534 | - | - | |
| HCH2g0137 | 537 | Pfam | Cytochrome P450 | 69 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | CDD | CYP78 | 100 | 527 | - | - | |
| HCH2g0137 | 537 | PANTHER | CYTOCHROME P450 78A7-RELATED | 7 | 529 | IPR051996 | - | |
| HCH2g0137 | 537 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 473 | 482 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 470 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 213 | 231 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 480 | 503 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 98 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 326 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | E-class P450 group I signature | 346 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | P450 superfamily signature | 471 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | P450 superfamily signature | 337 | 354 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | PRINTS | P450 superfamily signature | 480 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0137 | 537 | Gene3D | Cytochrome P450 | 53 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH2g0137 | HCH-Chr2:9640380 | HCH3g0127 | HCH-Chr3:811990 | 3.30E-133 | dispersed | |
| HCH2g0137 | HCH-Chr2:9640380 | HCH4g0157 | HCH-Chr4:876781 | 3.00E-134 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH2g0137 | K20619 | - | vvi:100257640 | 757.288 |