Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH2g0246 | ATGGAGCATTTCCTCGTCTCTCTCTTAATCCTCTTCATTTCCTGCATCTCTATAGCTCTCTTCATCCTCTTTTACAAACACAAATCCAAATTTGCGTATCCAAACATTCCTCCAGGCAGAATCGGGTATCCCGTAATTGGCGAAAGCCTGGAATTCTTATCCACTGGTTGGAAAGGTGAGCCAGAAAAGTTCATTTTCGATCGGCTTAGCAAGTATAAATCGGAAATCTTTAAAACTTCAATCGTCGGAGAACCCGCCGCCATTTTCTGCGGTCCGGTCTGCAACAAGTTCTTATTCTCTAATGAGAATAAACTTGTCAATGCATGGTGGCCGGATTCCGTCAATAAAATCTTTCCTTCTTCTACGCAAACAAGCTCCAAAGAAGAAGCTATAAAACTCAAAAAACTCCTTCCTCAGTTCCTTAAACCAGAAGCTCTGCAACGATATATCGGTATAATGGACGCCATCGCTCAAAAACACTTTGCTTCCTCTTGGGAAAACAAAGAAGAAATTGTCGTTTACCCCCTCGCTAAAAATTTCACTTTTTCACTGGCGTGTCGATTGTTCGTGAGCGTGGAGGATGAGATCCATGTGGAGAAGTTGTCAGGACCATTCCAGCACATAGCATCGGGAATCATATCGATGCCGATTAACTTGCCTGGAACGGCGTTTAACCGAGCCATAAAGGCATCGAACTTTATAAGAAATGAGCTAATGGCGATCGTGAAGCAAAGGAAGTGTGATTTGGGTGAAGGGAAGGCTTCGCCAACACAAGATATTCTTTCCCATATGCTTCTTACTTGCGATGAAGATGGGAAACACATGATTGAAAGTGATATAGCAGATAAGATTCTGGGTTTATTGATCGGTGGCCATGACACTGCAAGCGCCTCCTGCACTTTCATTGTCAAATATCTCGCTGAGCTTCCTCACATCTACGATGGAGTTTACAAGGAGCAAATGGAAATAGCAAAATCGAAAGCAGAAGGGGAATTATTGAACTGGGACGACATTCAGAAGATGAAGTACTCATGGAACGTAGCTTGTGAAGTGTTAAGACTTGCTTCCCCTCTTCAAGGTGCCTTTAGGGAGGCAATTAATGACTTTGTTTTCAATGGTTTCTATATTCCAAAGGGCTGGAAGCTATATTGGAGTTCAAACTCAACGCACAAAAATCCAGACTACTTTCCAAATCCATATAAGTTCGATCCATCGAGATTCGAAGGGAACGGTCCAGCTCCTTACACGTTTGTGCCGTTCGGCGGAGGGCCAAGGATGTGTCCAGGGAAAGAGTACGCTAGACTTGAAATTCTTGTTTTCATGCACAATTTGGTGAAACGATTCAAATGGACAAAAGTACTTGGAAAAGAGAAAATCATTGTAGATCCTATGCCCATTCCAGAGCACGGCCTTCCCGTTCGTCTTTTTCCTCATAAAAGCACTGTATAA | 1449 | 42.93 | MEHFLVSLLILFISCISIALFILFYKHKSKFAYPNIPPGRIGYPVIGESLEFLSTGWKGEPEKFIFDRLSKYKSEIFKTSIVGEPAAIFCGPVCNKFLFSNENKLVNAWWPDSVNKIFPSSTQTSSKEEAIKLKKLLPQFLKPEALQRYIGIMDAIAQKHFASSWENKEEIVVYPLAKNFTFSLACRLFVSVEDEIHVEKLSGPFQHIASGIISMPINLPGTAFNRAIKASNFIRNELMAIVKQRKCDLGEGKASPTQDILSHMLLTCDEDGKHMIESDIADKILGLLIGGHDTASASCTFIVKYLAELPHIYDGVYKEQMEIAKSKAEGELLNWDDIQKMKYSWNVACEVLRLASPLQGAFREAINDFVFNGFYIPKGWKLYWSSNSTHKNPDYFPNPYKFDPSRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWTKVLGKEKIIVDPMPIPEHGLPVRLFPHKSTV | 482 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 37816321 | 37821016 | - | evm.model.ptg000010l.1258 | HCH2g0246 | 539471 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH2g0246 | 482 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | CDD | CYP90-like | 68 | 477 | - | - | |
| HCH2g0246 | 482 | PANTHER | CYTOCHROME P450 26 | 35 | 453 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| HCH2g0246 | 482 | Pfam | Cytochrome P450 | 37 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH2g0246 | 482 | SUPERFAMILY | Cytochrome P450 | 32 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | Gene3D | Cytochrome P450 | 26 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0246 | 482 | FunFam | Taxadiene 5-alpha hydroxylase | 27 | 478 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH2g0246 | HCH-Chr2:37816321 | HCH2g0262 | HCH-Chr2:39136812 | 3.80E-290 | dispersed | |
| HCH2g0245 | HCH-Chr2:37751385 | HCH2g0246 | HCH-Chr2:37816321 | 1.20E-97 | tandem | |
| HCH7g0060 | HCH-Chr7:395472 | HCH2g0246 | HCH-Chr2:37816321 | 2.90E-75 | transposed | |
| HCH8g1097 | HCH-Chr8:46768633 | HCH2g0246 | HCH-Chr2:37816321 | 3.30E-201 | transposed | |
| HCH1g0208 | HCH-Chr1:30058158 | HCH2g0246 | HCH-Chr2:37816321 | 2.70E-10 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH2g0246 | K20667 | - | csv:101206033 | 808.905 |