Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0248 ATGGATTTGTTGCTAGTTCCTTATTCATCAGATCCCAGCCTTAAAATAATCCAATGGCCTCCCTTTTTACTTGCCAGCAAGATTCCAATAGCATTAGATATGGCTGCTGAATTTCGATCCAGAGACTCTGACCTCTGGAAGCGTATTTGTGCAGATGATTATATGAAATGTGCTGTGATCGAGTGCTATGAGTCTTTTAAAAATGTCCTGAGTGTTCTGGTGCTTGGAGAAAATGAGAAAAGGATTATTGGAACCATTATCAAAGAAGTTGAAAACAATATTTCAAAAAACACACTTCTTACAAATTTTAAAATGGGCCCTTTACCCATTTTATGCAAGAAGTTTGTGGAGCTTGTAGAGATCTTGAAAGATGGTGAGCCATCCAAGCGAGATACAGTAGTGCTTTTGCTACAGGATATGTTAGAAGTAGTCACTCAGGATATGATGCTCAATGAAATCCGTGAATTGGTAGAACTTGGTCATAACAAGGACACTGGAAGGCAACTCTTTGCTGGTACTGACTCTAGACCTGCTATAAACTTTCCTCCATCAGTTACAGCTCAATGGGAAGAGCAGATAAGACGCCTCTATTTACTATTGACTGTGAAAGAATCAGCCATTGATGTTCCTACAAATCTTGAAGCACGCAGAAGAATTGCATTTTTCACAAATTCTTTATTTATGGATATGCCACGTGCTCCACGAGTCCGTAAGATGCTATCATTCAGTGTCATGACTCCATATTATAGCGAGGAGACCGTCTACTCTAAAACTGACCTTGAGATGGAAAATGAAGATGGTGTTTCCATCATATATTACTTGCAGAAGATCTTTCCAGATGAATGGAACAACTTCATGGAGCGACTCAATTGTAAAAAAGACAGCGAGGTTTGGGAAAATGAAGAAAACATTTTACATCTTCGTCATTGGGTCTCTTTACGAGGACAGACTCTATGCAGAACTGTTAGAGGTATGATGTACTACCGAAGGGCTCTTAAGCTTCAGGCGTTTCTTGACATGGCTTCTGAGAGTGAGATACTTGAAGGCTACAAAGCGATCACGGTTCCAACAGAAGAGGATAAAAGAAGCCAAAGATCCCTATATGCTCAATTAGAGGCTGTGGCTGACATGAAATTCACATATGTTGCTACCTGCCAGAACTATGGAAATCAGAAGCGGAGTGGGGATCGCCGAGCTACAGATATCCTAAATCTGATGGTCAATAATCCCTCTCTCAGGGTGGCATATATTGACGAAGTTGAAGAAAGAGAAGGTGGAAAACCACAGAAAGTTTACTATTCTGTGTTGATCAAAGCTGTTGATAATCTGGACCAGGAAATATATCGGATTAAACTGCCTGGCGCAGCTAAGATTGGAGAAGGGAAACCTGAAAATCAGAACCATGCTATAATTTTTACCCGAGGCGAAGCTCTTCAAGCCATTGACATGAATCAGGACAATTACTTGGAAGAAGCATTTAAAATGCGAAACCTTCTAGAAGAGTTTAATGAGGACCATGGTGTTCGTGCACCTACAATCTTAGGTGTGCGTGAACATATCTTTACTGGAAGTGTCTCTTCTTTGGCTTGGTTTATGTCAAATCAGGAAACTAGCTTTGTCACCATTGGCCAAAGAGTTCTCGCAAGACCTTTAAAGGTGAGGTTCCACTATGGTCATCCTGATGTTTTTGATAGAATCTTCCATATTACCCGTGGTGGAATGAGCAAAGCTTCTCGAGGCATCAACCTGAGTGAGGATATCTTTGCTGGTTTTAACTCAACACTAAGACGTGGAAATGTTACACATCATGAGTACATTCAAGTTGGAAAGGGGAGAGATGTTGGTCTTAATCAAATCTCTCTTTTTGAGGCAAAGGTGGCTTGTGGTAATGGCGAGCAAACTCTCAGCAGGGATATCTATCGTCTAGGGCATCGTTTTGACTTTTTCCGCATGCTATCTTTCTATTTCACAACAGTAGGATTTTATGTCAGTGCCATGATGATTGTACTTACAGTCTATCTTTTCTTATATGGTAAACTTTACCTGTCATTAAGTGGATTGGAGAAGTCAATAGTGAAATTTGCTCGAGCAAAAGGAAATGATCCTTTAAAGGCAGCAATGGCTTCACAATCAGTTGTTCAGTTAGGTCTTTTAACTGCCTTGCCCATGGTCATGGAAATTGGGCTTGAGAGAGGGTTTCGGACTGCAATAGGTGACATAATAATCATGCAATTACAACTTGCAGCTGTTTTTTTCACCTTCTCTCTTGGCACAAAGGTCCACTATTACGGGCGCACAATCCTGCATGGTGGGGCAACATATAGAGCTACTGGTCGTGGCTTTGTTGTCCGGCATGAAAAATATGCTGAGAACTATAGGATGTATTCAAGGAGTCACTTTGTCAAAGGACTAGAGCTTATGATCTTGCTTGTAACTTACCAGATTTATGGTTCAGCCGCTCCTGATGCTATAGCTTACACTCTTCTCACTTCCTCAATGTGGTTCTTGGTTGTTTCCTGGTTATTTGCTCCTTTCCTTTTTAACCCTTCAGGGTTTGAATGGCAAAAGATAGTAGATGACTGGGACGATTGGTCAAAATGGATGAGCAGCAGAGGTGGTATTGGTGTGCCAGCCAACAAAAGTTGGGAGTCCTGGTGGGATGAGGAACAAGAACACCTACAGCACACTGGATTCCTTGGACGTTTCTGGGAGATTGCTCTATCCATTCGATTCTTTATCTATCAGTATGGAATAGTGTATCATCTGCATGTGTCCGGAAATAACAAAAGCATCACGGTGTATGGATTGTCTTGGCTTGTCATTGTTGCCGTGATGGTTATACTAAAGATTGTGTCCTTCGGTAGAAAGAAATTCAGTGCCGATTTCCAGCTAATGTTCAGACTTTTGAAGTTCTTCCTGTTTATTGGATCAGTGGTCGTAGTAGCAATGCTATTTACACTTCTCCATCTTACAGTTGGAGACATTTTTGCGAGCTTACTAGCCTTTGTGCCCACCGGATGGGCTCTGTTGCAAATTGGACAAGCCTGCAGACCGATGTTGAAGGCGGTGGCAATGTGGGGATCGGTCAAAGCTTTAGCAAGAGGATACGAGTACTTGATGGGTCTGGTTATTTTCACACCAGTAGCTGTATTGGCCTGGTTCCCTTTCGTATCAGAGTTCCAAACTAGGCTACTCTTTAACCAAGCCTTCAGCCGAGGGCTTCAGATCCAACGTATTTTGGCTGGTGGTAAGAAGCACAAGTAA 3264 41.82 MDLLLVPYSSDPSLKIIQWPPFLLASKIPIALDMAAEFRSRDSDLWKRICADDYMKCAVIECYESFKNVLSVLVLGENEKRIIGTIIKEVENNISKNTLLTNFKMGPLPILCKKFVELVEILKDGEPSKRDTVVLLLQDMLEVVTQDMMLNEIRELVELGHNKDTGRQLFAGTDSRPAINFPPSVTAQWEEQIRRLYLLLTVKESAIDVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKTDLEMENEDGVSIIYYLQKIFPDEWNNFMERLNCKKDSEVWENEENILHLRHWVSLRGQTLCRTVRGMMYYRRALKLQAFLDMASESEILEGYKAITVPTEEDKRSQRSLYAQLEAVADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKPQKVYYSVLIKAVDNLDQEIYRIKLPGAAKIGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEAFKMRNLLEEFNEDHGVRAPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFYVSAMMIVLTVYLFLYGKLYLSLSGLEKSIVKFARAKGNDPLKAAMASQSVVQLGLLTALPMVMEIGLERGFRTAIGDIIIMQLQLAAVFFTFSLGTKVHYYGRTILHGGATYRATGRGFVVRHEKYAENYRMYSRSHFVKGLELMILLVTYQIYGSAAPDAIAYTLLTSSMWFLVVSWLFAPFLFNPSGFEWQKIVDDWDDWSKWMSSRGGIGVPANKSWESWWDEEQEHLQHTGFLGRFWEIALSIRFFIYQYGIVYHLHVSGNNKSITVYGLSWLVIVAVMVILKIVSFGRKKFSADFQLMFRLLKFFLFIGSVVVVAMLFTLLHLTVGDIFASLLAFVPTGWALLQIGQACRPMLKAVAMWGSVKALARGYEYLMGLVIFTPVAVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHK 1087
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38282098 38290383 - evm.model.ptg000010l.1256 HCH2g0248 539473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0248 1087 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1085 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
HCH2g0248 1087 Pfam 1,3-beta-glucan synthase component 209 903 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0248 HCH-Chr2:38282098 HCH4g1225 HCH-Chr4:8332096 0.00E+00 dispersed
HCH2g0248 HCH-Chr2:38282098 HCH8g0491 HCH-Chr8:41235869 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0248 K11000 - csv:101219503 2043.47