Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0292 ATGACTGAAAAGTCGGCGAATGAATCTCCGTTGAAGCTGTATTCGTACTGGAGAAGCTCTTGTTCTCAACGTGTTCGAATTGCCCTCCACTTGAAAGGGCTAAACTATGAGTACATACCTGTTAACTTACTGAAGAATGAGCAATTCTCTCCTGAATTTAAGAAGTTCAATCCTATTGGTTATGTACCTGCTCTCGAGGATGGGAATGTTGTTATTGCTGATTCTCTTGCTATTATAATGTATTTGGAGGATAAGTATCCTCAACGTTCTCTGTTGCCTCTTGATGTTCATAAAAGAGCTATTAATTACCAGGCTGCGAATATTGTTTCCTCAAGCATACAACCTCTTCAAAATCTAGGTGTTCTGAAGTACATTGAGGAAAAATGTGGTCCGGATGAGAAACTTTCTTGGGTTCGAGGTCACATTGGAAATGGTTTTTCAGCCCTTGAAAATCTGCTAAAAGCTCATGCTGGAAAATATGCTACTGGAGATGAAATTTACCTGGCAGACTTATTTTTGGCCCCTCAGCTTTACACTGCTATTAACAGATTCCAAGTCGACATGTCCAAATTTCCGCTGCTTTCCAGATTGAATGAGGAATACAATAATATCCCAGCATTTCAAGATAATATACCAGATAAACAGCCGGATGCTCCTTCACAAAGCTCTACTTAA 675 39.56 MTEKSANESPLKLYSYWRSSCSQRVRIALHLKGLNYEYIPVNLLKNEQFSPEFKKFNPIGYVPALEDGNVVIADSLAIIMYLEDKYPQRSLLPLDVHKRAINYQAANIVSSSIQPLQNLGVLKYIEEKCGPDEKLSWVRGHIGNGFSALENLLKAHAGKYATGDEIYLADLFLAPQLYTAINRFQVDMSKFPLLSRLNEEYNNIPAFQDNIPDKQPDAPSQSST 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41857012 41862278 - evm.model.ptg000010l.1212 HCH2g0292 539517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0292 224 SUPERFAMILY Thioredoxin-like 5 93 IPR036249 -
HCH2g0292 224 Pfam Glutathione S-transferase, N-terminal domain 13 89 IPR004045 -
HCH2g0292 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 9 90 IPR004045 -
HCH2g0292 224 MobiDBLite consensus disorder prediction 205 224 - -
HCH2g0292 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 220 IPR010987 -
HCH2g0292 224 CDD GST_N_Zeta 11 83 IPR034333 -
HCH2g0292 224 PANTHER MALEYLACETOACETATE ISOMERASE 10 218 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
HCH2g0292 224 Pfam Glutathione S-transferase, C-terminal domain 135 206 IPR004046 -
HCH2g0292 224 Gene3D Glutaredoxin 9 93 - -
HCH2g0292 224 SFLD Main (cytGST) 11 196 - -
HCH2g0292 224 FunFam Maleylacetoacetate isomerase 94 221 - -
HCH2g0292 224 FunFam Glutathione S-transferase Z1 9 93 - -
HCH2g0292 224 SFLD Glutathione Transferase (cytosolic) 11 196 IPR040079 -
HCH2g0292 224 CDD GST_C_Zeta 97 215 IPR034330 -
HCH2g0292 224 NCBIfam maleylacetoacetate isomerase 12 218 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
HCH2g0292 224 SUPERFAMILY GST C-terminal domain-like 90 219 IPR036282 -
HCH2g0292 224 Gene3D - 94 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0292 HCH-Chr2:41857012 HCH7g1544 HCH-Chr7:47913745 7.50E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0292 K01800 - rcu:8262645 329.331