Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0341 ATGGAGATATGGTTTCTGATCGTCATCTCCATCTGCATCTGCGCCCTCTTGAAAGCCATTTTTAGCAATCTCCTGCTCCCCTCAAAACTCCCACCGGGCCCTCCACACTTTCCCATTCTCAGCAATCTCTTATGGCTTCGAAAATCTCCTATTGAATTCGAATCCGCACTACGGAAACTTCACTCCAAATATGGCCCCATCATCACTGTCTACATCGGCCCTTCCCCCACCATCTTCATCTCCGATCATTCCATCGCTCACAAAGCCTTGATTCAAAACGGTGCTGTTTTCGCTGACCGTCCACCCGTTCTTCCAATTGGCAAAATCCTTAGTAGTAATCAGATCAATATCAATTCCTCCTTTTACGGCCCGACTTGGCGTCTTTTCCGTCGTAATCTTACTTCCGAAATCCTTAATCCTTCACGCGTCAAGTCTTATGTGCATGCACGTAAGTGGGTTTTGGGTATTCTTTTTCATCGTCTCTTGTCTCTGTCTCAATCTGGAAGTGCTGTTTGTGTCGTGAACCATTTTCAGTTTTCTATGTTTTGTTTGTTGGTTTTGATGTGTTTTGGAGATAAGCTTGATGAGAATCAGATCCGGGAAATAGAGGACGTGCAGCGTACGTTGTTGTTAAGTCTTGGACGTTTTAATATCCTTAATTTCTGGCCAAGAGTCACTAAGATTTTGCTTCGTAATCGTTGGAAGGAGTTTTTTGAAATAAAGAAAAGGCACGAGACGGTGTTGATTTCTTTGATTGAAGCGCGGAAGAAGGCTAAGCTAGGGAGGTTTGATGAAGTTAAAGACGGCGAAGAAAAAGAAGAAGAGTTTGTGTTGTCGTATGTCGACACGTTGCTGAATTTGGAGCATCCTAAGGAGGAGAGGAAGCTCAACAATCGTGAAATAGCCAACATGTGCTCGGAGTTTCTCAACGCCGGCACCGATACTACTTCGACGGCGTTGCAGTGGATAATGGCGAATTTAGTCAAGTTCCCAGATATACAAGAGAGGGTTTTTGAAGAGATTAAGGAAGTTGTTGGAAATGGAGCAGAGGAGGTTAAGGAAGAGGAATTGGGGAAGCTTCCGTATCTAAAAGCAGTGGTTTTGGAAGGTTTAAGAAGGCACCCACCTGGGCATTTTGTGTTGCCTCATGCTGTGAAGGAGGATGTGATGTTGGAAGGTTATAGAATTCCTAAAAATGGAACTGTGAATTTTCTGTTGGCAGTGATGGGTTTGGATCCAAAGGTGTGGGAAGATCCAATGGAATTCAAGCCGGAGAGATTCATCAAGAGTGAAGAAAATGGCAAGGAAATGTTTGACATAACAGGAAATAAGGAGATAAAAATGATGCCATTTGGGGCTGGGAGGAGGATGTGCCCAGCATTTGCTCTGGCGATGCTTCATTTGGAGTTTTTTGTTGCCAATTTGATATGGCGTTTTGAGTGGAAGCCTCTCGATGGAGATGATGTTGATCTATCAGAAAAAGTAGAATTCTTAACAGTCATGAAGAAGCCTTTACTGGCTCATATACGTTCCAGGTTTTAG 1542 43.64 MEIWFLIVISICICALLKAIFSNLLLPSKLPPGPPHFPILSNLLWLRKSPIEFESALRKLHSKYGPIITVYIGPSPTIFISDHSIAHKALIQNGAVFADRPPVLPIGKILSSNQININSSFYGPTWRLFRRNLTSEILNPSRVKSYVHARKWVLGILFHRLLSLSQSGSAVCVVNHFQFSMFCLLVLMCFGDKLDENQIREIEDVQRTLLLSLGRFNILNFWPRVTKILLRNRWKEFFEIKKRHETVLISLIEARKKAKLGRFDEVKDGEEKEEEFVLSYVDTLLNLEHPKEERKLNNREIANMCSEFLNAGTDTTSTALQWIMANLVKFPDIQERVFEEIKEVVGNGAEEVKEEELGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDVMLEGYRIPKNGTVNFLLAVMGLDPKVWEDPMEFKPERFIKSEENGKEMFDITGNKEIKMMPFGAGRRMCPAFALAMLHLEFFVANLIWRFEWKPLDGDDVDLSEKVEFLTVMKKPLLAHIRSRF 513
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 44460407 44461948 + evm.model.ptg000010l.1163 HCH2g0341 539566
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0341 513 CDD CYP77_89 63 505 - -
HCH2g0341 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 509 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
HCH2g0341 513 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 Gene3D Cytochrome P450 27 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH2g0341 513 FunFam Cytochrome P450 family protein 26 513 - -
HCH2g0341 513 Pfam Cytochrome P450 31 499 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0341 513 SUPERFAMILY Cytochrome P450 31 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0130 HCH-Chr10:1058650 HCH2g0341 HCH-Chr2:44460407 1.00E-155 dispersed
HCH1g0600 HCH-Chr1:54885049 HCH2g0341 HCH-Chr2:44460407 5.50E-09 dispersed
HCH1g0727 HCH-Chr1:56086021 HCH2g0341 HCH-Chr2:44460407 1.60E-97 dispersed
HCH2g0341 HCH-Chr2:44460407 HCH2g0356 HCH-Chr2:45288194 6.70E-208 dispersed
HCH2g0341 HCH-Chr2:44460407 HCH2g0342 HCH-Chr2:44464867 1.20E-129 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0341 K24184 - csv:101204559 714.916