Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH2g0341 | ATGGAGATATGGTTTCTGATCGTCATCTCCATCTGCATCTGCGCCCTCTTGAAAGCCATTTTTAGCAATCTCCTGCTCCCCTCAAAACTCCCACCGGGCCCTCCACACTTTCCCATTCTCAGCAATCTCTTATGGCTTCGAAAATCTCCTATTGAATTCGAATCCGCACTACGGAAACTTCACTCCAAATATGGCCCCATCATCACTGTCTACATCGGCCCTTCCCCCACCATCTTCATCTCCGATCATTCCATCGCTCACAAAGCCTTGATTCAAAACGGTGCTGTTTTCGCTGACCGTCCACCCGTTCTTCCAATTGGCAAAATCCTTAGTAGTAATCAGATCAATATCAATTCCTCCTTTTACGGCCCGACTTGGCGTCTTTTCCGTCGTAATCTTACTTCCGAAATCCTTAATCCTTCACGCGTCAAGTCTTATGTGCATGCACGTAAGTGGGTTTTGGGTATTCTTTTTCATCGTCTCTTGTCTCTGTCTCAATCTGGAAGTGCTGTTTGTGTCGTGAACCATTTTCAGTTTTCTATGTTTTGTTTGTTGGTTTTGATGTGTTTTGGAGATAAGCTTGATGAGAATCAGATCCGGGAAATAGAGGACGTGCAGCGTACGTTGTTGTTAAGTCTTGGACGTTTTAATATCCTTAATTTCTGGCCAAGAGTCACTAAGATTTTGCTTCGTAATCGTTGGAAGGAGTTTTTTGAAATAAAGAAAAGGCACGAGACGGTGTTGATTTCTTTGATTGAAGCGCGGAAGAAGGCTAAGCTAGGGAGGTTTGATGAAGTTAAAGACGGCGAAGAAAAAGAAGAAGAGTTTGTGTTGTCGTATGTCGACACGTTGCTGAATTTGGAGCATCCTAAGGAGGAGAGGAAGCTCAACAATCGTGAAATAGCCAACATGTGCTCGGAGTTTCTCAACGCCGGCACCGATACTACTTCGACGGCGTTGCAGTGGATAATGGCGAATTTAGTCAAGTTCCCAGATATACAAGAGAGGGTTTTTGAAGAGATTAAGGAAGTTGTTGGAAATGGAGCAGAGGAGGTTAAGGAAGAGGAATTGGGGAAGCTTCCGTATCTAAAAGCAGTGGTTTTGGAAGGTTTAAGAAGGCACCCACCTGGGCATTTTGTGTTGCCTCATGCTGTGAAGGAGGATGTGATGTTGGAAGGTTATAGAATTCCTAAAAATGGAACTGTGAATTTTCTGTTGGCAGTGATGGGTTTGGATCCAAAGGTGTGGGAAGATCCAATGGAATTCAAGCCGGAGAGATTCATCAAGAGTGAAGAAAATGGCAAGGAAATGTTTGACATAACAGGAAATAAGGAGATAAAAATGATGCCATTTGGGGCTGGGAGGAGGATGTGCCCAGCATTTGCTCTGGCGATGCTTCATTTGGAGTTTTTTGTTGCCAATTTGATATGGCGTTTTGAGTGGAAGCCTCTCGATGGAGATGATGTTGATCTATCAGAAAAAGTAGAATTCTTAACAGTCATGAAGAAGCCTTTACTGGCTCATATACGTTCCAGGTTTTAG | 1542 | 43.64 | MEIWFLIVISICICALLKAIFSNLLLPSKLPPGPPHFPILSNLLWLRKSPIEFESALRKLHSKYGPIITVYIGPSPTIFISDHSIAHKALIQNGAVFADRPPVLPIGKILSSNQININSSFYGPTWRLFRRNLTSEILNPSRVKSYVHARKWVLGILFHRLLSLSQSGSAVCVVNHFQFSMFCLLVLMCFGDKLDENQIREIEDVQRTLLLSLGRFNILNFWPRVTKILLRNRWKEFFEIKKRHETVLISLIEARKKAKLGRFDEVKDGEEKEEEFVLSYVDTLLNLEHPKEERKLNNREIANMCSEFLNAGTDTTSTALQWIMANLVKFPDIQERVFEEIKEVVGNGAEEVKEEELGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDVMLEGYRIPKNGTVNFLLAVMGLDPKVWEDPMEFKPERFIKSEENGKEMFDITGNKEIKMMPFGAGRRMCPAFALAMLHLEFFVANLIWRFEWKPLDGDDVDLSEKVEFLTVMKKPLLAHIRSRF | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 44460407 | 44461948 | + | evm.model.ptg000010l.1163 | HCH2g0341 | 539566 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH2g0341 | 513 | CDD | CYP77_89 | 63 | 505 | - | - | |
| HCH2g0341 | 513 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 13 | 509 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | Gene3D | Cytochrome P450 | 27 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH2g0341 | 513 | FunFam | Cytochrome P450 family protein | 26 | 513 | - | - | |
| HCH2g0341 | 513 | Pfam | Cytochrome P450 | 31 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH2g0341 | 513 | SUPERFAMILY | Cytochrome P450 | 31 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0130 | HCH-Chr10:1058650 | HCH2g0341 | HCH-Chr2:44460407 | 1.00E-155 | dispersed | |
| HCH1g0600 | HCH-Chr1:54885049 | HCH2g0341 | HCH-Chr2:44460407 | 5.50E-09 | dispersed | |
| HCH1g0727 | HCH-Chr1:56086021 | HCH2g0341 | HCH-Chr2:44460407 | 1.60E-97 | dispersed | |
| HCH2g0341 | HCH-Chr2:44460407 | HCH2g0356 | HCH-Chr2:45288194 | 6.70E-208 | dispersed | |
| HCH2g0341 | HCH-Chr2:44460407 | HCH2g0342 | HCH-Chr2:44464867 | 1.20E-129 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH2g0341 | K24184 | - | csv:101204559 | 714.916 |