Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0356 ATGAATTCCCAAAAGCAAAAGAAAAAAAAAAACAGAGAGATGGAAAAATGGTTACTTATCCTAATCTCTCTCTGCATCTGCTCCCTTCTCAAGTCCATAATCAACCTTCTCTTCCCTTCCAAACTCCCACCTGGACCTCCAAACTTCCCCATCATTTCCAGATTCCAATGGCTCAAAAAATCACCCATGGAAATAGAGTCTCTCTTACGCACTTTCCACGCCAAATATGGCCCCGTCGTCACCCTCCAAATCGGCCCTCGCCCCTCCATCTTCATCGCCGACCGTTCCCTCGCCCACCAAGCCTTAGTCCATAACGGCGCTTTATTCGCCGACCGTCCACCGGCACTAGAAACCAACAAGATCATAAGCAGCAATCAACATAACATCAGCTCTGCTTCTTACGGGTCAACCTGGCGTCTCCTTCGCCGTAATCTCACTTCTGAAATCCTTCATCCTTCACGTGTTAAATCTTACGGTCGTGCTCGTAAATGGGTTTTGGATATTTTGATGAATCGTCTCTTATCTCAATCTGGTACCCCTGTTACTGTTGTTGATCATTTTCAATATTCCATGTTTTGTTTATTGGTTTTGATGTGTTTTGGTGATAAGCTTGACGAGAATAAAATCAAGGAAATCGAGGATGTGCAGCGTAAGTTGTTGTTAAAATTTGGACTTTTTAATGTTCTTAATTTCTGGCCTAGATTGACTAAGATTTTCCTTCGTAAACGATGGGAGGATTTACTTCAACTTAGAAGCAAGCAAGAGCAAATATTAATCCCTTTGATTGAATCAAGGAGGAACGCTAAGGAAGGGAGAGGAAACACGGTTACGGAAGGAGACGAATTCGTGGTTTCGTATGTCGATACCTTGCTCGATTTGCAACTTACGGATGAGAAGAGGAAGCTTACGGAGGGCGAAATGGTTAGTATATGCTCGGAGTTTCTCAACGCCGGGACCGATACGACGTCCACGGCATTGCAATGGATAATGGCTAATTTAGTGAAGTACCCAACTGTGCAAGAGAAGCTTTATGCTGAGATGAAAGGAGTGATTGGAGATGGAGTGGAAGAAGTGAAGGAAGAAGATTTAGGGAAGCTTCCATATTTGAAAGCTGTGGTTTTAGAAGGATTAAGAAGGCACCCACCAGGACATTTTGTGTTACCACATGCAGTTAAAGAAGATACAGTGTTGGGAAATTATGTGATACCAAAAAACGGGACAGTAAATTTCATGGTGGCAGAGATGGGATGGGATCCAAAAGTGTGGGAAGATCCAATGGCATTTAAGCCAGAGAGGTTTATTATGAACAATGGTGAAGAAGATGAAAATGGATCAAAAGAAGGAGTGGCAGCATTTGATATAACAGGGAATAAGGAGATAAAGATGATGCCTTTTGGAGTGGGGAGGAGGATATGTCCAGGGTTTGTTTTAGCAATGCTTCATTTGGAGTATTTTGTTGCCAATTTGGTGTGGAGATTTGAGTGGAAGGCTGTGGAAGGAGATGACGTTGATCTATCAGAGAAGGTGGAGTTCACTGTTGTAATGAAGAAACCCCTCAAAGCAAATATACATCCAAGGTTTTAG 1584 42.74 MNSQKQKKKKNREMEKWLLILISLCICSLLKSIINLLFPSKLPPGPPNFPIISRFQWLKKSPMEIESLLRTFHAKYGPVVTLQIGPRPSIFIADRSLAHQALVHNGALFADRPPALETNKIISSNQHNISSASYGSTWRLLRRNLTSEILHPSRVKSYGRARKWVLDILMNRLLSQSGTPVTVVDHFQYSMFCLLVLMCFGDKLDENKIKEIEDVQRKLLLKFGLFNVLNFWPRLTKIFLRKRWEDLLQLRSKQEQILIPLIESRRNAKEGRGNTVTEGDEFVVSYVDTLLDLQLTDEKRKLTEGEMVSICSEFLNAGTDTTSTALQWIMANLVKYPTVQEKLYAEMKGVIGDGVEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTVLGNYVIPKNGTVNFMVAEMGWDPKVWEDPMAFKPERFIMNNGEEDENGSKEGVAAFDITGNKEIKMMPFGVGRRICPGFVLAMLHLEYFVANLVWRFEWKAVEGDDVDLSEKVEFTVVMKKPLKANIHPRF 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45288194 45289777 + evm.model.ptg000010l.1148 HCH2g0356 539581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0356 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH2g0356 527 FunFam Cytochrome P450 family protein 38 527 - -
HCH2g0356 527 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 CDD CYP77_89 75 520 - -
HCH2g0356 527 Pfam Cytochrome P450 43 517 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 SUPERFAMILY Cytochrome P450 43 526 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0356 527 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 25 526 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
HCH2g0356 527 Gene3D Cytochrome P450 39 527 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0340 HCH-Chr13:2281347 HCH2g0356 HCH-Chr2:45288194 1.10E-96 dispersed
HCH2g0341 HCH-Chr2:44460407 HCH2g0356 HCH-Chr2:45288194 6.70E-208 dispersed
HCH2g0342 HCH-Chr2:44464867 HCH2g0356 HCH-Chr2:45288194 1.70E-134 dispersed
HCH2g0356 HCH-Chr2:45288194 HCH5g0407 HCH-Chr5:2685595 1.10E-56 dispersed
HCH10g0130 HCH-Chr10:1058650 HCH2g0356 HCH-Chr2:45288194 4.80E-169 transposed
HCH2g0356 HCH-Chr2:45288194 HCH5g0782 HCH-Chr5:6000120 9.70E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0356 K24184 - csv:101204559 757.673