Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH2g0544 | ATGGCTTCTTTTCTCTCTCTTTCTCTTTCTCTCTCCATTTTTCTCCTTTCTTTCACCCATTTCTCCCCCATTTCCGCCCTCTTCCCTTTGAAAAAAACCTTCATTTTCCTCATCGACTCTCAATCTAAACCCTCCATTTTCCCCACCCATTACCACTGGTACACTTCTGAATTCGTTCAATCCCCACAAATCCTTCATCTTTACGACACCCTTTTCCATGGATTCTCCGCTTCTCTCACTCCCGACCAATTCTCTTCCCTCAAACAACACCCTTCCATTCTAGCTGCCTTCGAAGACCGTCGCCGCAATCTCCACACCACTCGCTCCCCTCAATTCCTCGGCCTCCGTAACCAGCGCGGTCTTTGGTCCGATTCCGATTACGGCTCTGACGTCATCGTCGGAGTTTTCGATACTGGGATTTCCCCAGAACGACGTAGTTTCTCCGATGTTAATCTCGGTCCGATCCCCCGTCGTTGGAAGGGTGTTTGTGAAACCGGAACGAAATTCAGTGCTAAAAACTGCAACAGGAAAATCATCGGAGCGAGGTTTTTCTCTAAAGGTCATGAAGCCGGGTCTAATAACGGCGGTGGTCCATTCATTGGGATTAATGATACCGTTGAGTTTCGATCACCGAGAGACGCTGACGGACATGGGACCCACACGGCTTCCACGGCGGCGGGGCGTTATTCGTTCCAAGCGAGTTTAGACGGTTACGCTTCTGGGATTGCGAAGGGGGTTGCTCCGAAAGCGAGATTGGCGGTTTATAAAGTTTGCTGGAAGAACGCCGGTTGTTTTGATTCCGATATCCTCGCGGCGTTTGATGCTGCTGTTAAAGACGGAGTTGATGTCATTTCGATTTCGATTGGTGGCGGTGATGGCGTTTCTTCCCCGTATTATCTCGACCCAATTGCGATTGGGGCGTACGGTGCTGCTTCTAGAGGTGTTTTTGTTTCGTCTTCCGCTGGTAATGATGGGCCTAATGGGATGTCTGTGACGAATTTGGCGCCATGGATGACGACGGTCGGGGCGGGGACGATTGATCGGAGTTTTCCGGCTGTGGTGAGTCTTGGCAATGGGCAGAAGGTTAATGGGGCGTCATTGTATTCAGGGGCAGCATTGAATGGGAAAATGTATCCTTTGGTTTATCCTGGGAAAAATGGGGTTCTTGCTGCTTCTCTTTGTATGGAGAATTCGCTTGATTTTGAGGTTGTCAGCGGCAAAATTGTAATATGTGATCGTGGGAGTAGTCCTAGAGTGGCCAAGGGATTGGTGGTTAAGAAAGCTGGTGGTGTTGGAATGATTCTTGCTAATGGAATTTCTAATGGTGAAGGGCTTGTGGGTGATGCTCATGTGATTCCTGCTTGTGCTGTGGGTTCTGATGAAGGTGATGCTTTGAAAGCTTATGTGAAATCGAATCCCAATCCTACTGCTACCATTGATTTCAAGGGTACTATAATTGGGATCAAACCGGCCCCTGTCGTGGCGTCGTTCTCGGCCAGAGGACCGAGTGGATTGAATCCGGAGATTCTGAAGCCGGATTTGATTGCTCCTGGGGTTAACATTTTGGCTGCTTGGACAGATTCTGTCGGTCCGACTGGCTTGGATTTCGATACTCGAAAAACCGAGTTCAATATCTTGTCCGGGACATCAATGGCTTGTCCTCATGTCAGTGGTGCTGCTGCGTTGCTTAAATCTGCTCATCCAGATTGGAGTCCGGCTGCATTGAGATCTGCTTTGATGACGACGGCGAGAATTGTTGATAATCGAGGGCTACCGATGACTGAGGAGTCGACAGGAAAACCATCTACACCTTATGATTTTGGTGCTGGACATGTGAATTTGGGACTTGCAATGGACCCTGGGTTGGTGTATGATATCATAAATGCTGATTATGTGAACTTCTTATGCGGAATTGGGTACGGAGCGAAGACGATTCAGGTGATCACGAGGACGCCGGTGACTTGTCCTGCTAAGAAACCATTGCCGGAGAACCTGAATTACCCATCGATGGTTGCGCTGTTTTCAATTCCAGCCAAAGGGTTGTCGACCAAGTCGTTTATTCGTACGGTAACGAATGTCGGTCCATCGAATTCGACTTACCGAGCGAAAGTCGAGGCACCGAAAGGGGTGACGGTGAAAGTAAAGCCGACGAAACTAGTGTTCACAACAGCAGTGAAGAAGCAAAGTTTCGTTGTAACAGTATCAGCCGACAGCCAGAATCTGGCATTAGGTGATGCAGGGGCTGTTTTTGGTTCACTTTCTTGGTTGGATGGAAAGCATGTGGTCCGAAGCCCAATTGTGGTGACTCAAATAGAACCGTTGTGA | 2325 | 48.77 | MASFLSLSLSLSIFLLSFTHFSPISALFPLKKTFIFLIDSQSKPSIFPTHYHWYTSEFVQSPQILHLYDTLFHGFSASLTPDQFSSLKQHPSILAAFEDRRRNLHTTRSPQFLGLRNQRGLWSDSDYGSDVIVGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFSAKNCNRKIIGARFFSKGHEAGSNNGGGPFIGINDTVEFRSPRDADGHGTHTASTAAGRYSFQASLDGYASGIAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVKDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWMTTVGAGTIDRSFPAVVSLGNGQKVNGASLYSGAALNGKMYPLVYPGKNGVLAASLCMENSLDFEVVSGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHVIPACAVGSDEGDALKAYVKSNPNPTATIDFKGTIIGIKPAPVVASFSARGPSGLNPEILKPDLIAPGVNILAAWTDSVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSALMTTARIVDNRGLPMTEESTGKPSTPYDFGAGHVNLGLAMDPGLVYDIINADYVNFLCGIGYGAKTIQVITRTPVTCPAKKPLPENLNYPSMVALFSIPAKGLSTKSFIRTVTNVGPSNSTYRAKVEAPKGVTVKVKPTKLVFTTAVKKQSFVVTVSADSQNLALGDAGAVFGSLSWLDGKHVVRSPIVVTQIEPL | 774 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 49248762 | 49251086 | + | evm.model.ptg000010l.960 | HCH2g0544 | 539769 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH2g0544 | 774 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 56 | 767 | IPR045051 | - | |
HCH2g0544 | 774 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 101 | 618 | - | - | |
HCH2g0544 | 774 | Pfam | Fibronectin type-III domain | 664 | 768 | IPR041469 | - | |
HCH2g0544 | 774 | FunFam | Subtilisin-like protease SBT1.5 | 130 | 366 | - | - | |
HCH2g0544 | 774 | Gene3D | - | 635 | 771 | - | - | |
HCH2g0544 | 774 | SUPERFAMILY | Subtilisin-like | 104 | 622 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH2g0544 | 774 | Pfam | Peptidase inhibitor I9 | 40 | 105 | IPR010259 | - | |
HCH2g0544 | 774 | SUPERFAMILY | PA domain | 400 | 474 | IPR046450 | - | |
HCH2g0544 | 774 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 30 | 105 | IPR037045 | - | |
HCH2g0544 | 774 | Gene3D | Peptidase S8/S53 domain | 130 | 631 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH2g0544 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
HCH2g0544 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 547 | 563 | IPR015500 | - | |
HCH2g0544 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 128 | 147 | IPR015500 | - | |
HCH2g0544 | 774 | FunFam | subtilisin-like protease SBT1.5 | 347 | 486 | - | - | |
HCH2g0544 | 774 | Pfam | Subtilase family | 128 | 610 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
HCH2g0544 | 774 | Pfam | PA domain | 378 | 465 | IPR003137 | - | |
HCH2g0544 | 774 | CDD | PA_subtilisin_like | 353 | 479 | - | - | |
HCH2g0544 | 774 | CDD | Peptidases_S8_3 | 104 | 583 | IPR034197 | - | |
HCH2g0544 | 774 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 548 | 558 | IPR023828 | - | |
HCH2g0544 | 774 | Gene3D | - | 347 | 486 | - | - | |
HCH2g0544 | 774 | FunFam | Subtilisin-like protease SBT1.5 | 635 | 771 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g1153 | HCH-Chr14:38356229 | HCH2g0544 | HCH-Chr2:49248762 | 1.30E-88 | dispersed | |
HCH2g0544 | HCH-Chr2:49248762 | HCH8g0597 | HCH-Chr8:42753632 | 3.60E-205 | dispersed | |
HCH4g0630 | HCH-Chr4:4128308 | HCH2g0544 | HCH-Chr2:49248762 | 7.20E-125 | transposed | |
HCH4g1548 | HCH-Chr4:12004080 | HCH2g0544 | HCH-Chr2:49248762 | 6.90E-233 | transposed | |
HCH12g0105 | HCH-Chr12:559257 | HCH2g0544 | HCH-Chr2:49248762 | 1.40E-145 | wgd |
Pathway information
