Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0555 ATGGCGAATAATCCCCACGACGAAGACGACCTCGATCTTCTCCTTTCTCTCCAAGACAGGGTTTTCGAAACCCCTCCTCCTTCTCCTTCTCACACTTCTGATTTTCTATCTGACGATGAATCACCATCACCTACGCCTCTGGGTCCTACCGATATGTCTGTCTTTAGAAATGCTGTTAAAGACTGTCTTGATTATGACCACAAACCATTTCCTACCAATACAAATGGTAACCGCTCTAAGGTGTCGAATCATGTTACGATCGACAAGTTTTCTGGTTTGCGAATTAGGAATCAACTGGTAACACCTGCTGAGCTTTGTGATCGTTTTTCGGACATTCGCTTTGCTCGTTTGTCCACCATCAAGAATCTGTTGGTTGGAGACACCCTTTCAGGGTGTTGGGCAACTGTTGGAGTGCTGACTGAGAAAGGGATTCCAAGGACAAGTTCTACTGGGAAGACTTACTGCATATGGAAAATTAGTTGTTTGGATGAAAATACTATTTCTGTTTTCTTATTTGGTGATGCTTATAAAAGAAATTGCAACGAGCCAGCGGGAACAGTCTTTGCACTTTTTAACGCTTCTGTACGCAAGGATGCAGTGGGTACAGGTTTTTCTCTAAGCGTGTATCAATCAAGCCATATCTTGAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGACGAAAGACGGAGTGGCTTGTACAGTAATCATAAATAGGCGACGTGGCATATACTGTAAATATCACAAATCAAAGGTATCAGAAAAATATTCCACAACCATGCGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGGATTCAGAGATCATCTCAAGTCAGAAGGAATTTACTTGGTTGATCCACTAGCTAACAAAACAAACTCTAAAAAGCCGGCACTTCCAGTTAAACTTTTGTCTGTGGAAGGCCTAAAAAAGGCATTGAGCAATGCAGATAAAGTGACTACTAATGTGCATTCACAAGGGAAAAGGTTTCTTGCTGAGATCACAGGGAAAACGAGTCATAAAGACGCTACACAAAATCACCAGAAGATCAGCTCAGAGAAGAGGAAACCATCTACTGTGAAAATGGATTCAGAAGTTATAGAAAACCAAAAACAGGATCCAAAACGAAAGAAAACTGAACATGTTCTGGCAGACAAAATGAAAAAAAACAGTGGGAAGATGATTGAGTTAGATTACGTTAGTTCTGATGATGAAGAAACTGGCTTCTATTTCCCTGATAAGCCCACTGGTGCGCTTTGA 1269 41.69 MANNPHDEDDLDLLLSLQDRVFETPPPSPSHTSDFLSDDESPSPTPLGPTDMSVFRNAVKDCLDYDHKPFPTNTNGNRSKVSNHVTIDKFSGLRIRNQLVTPAELCDRFSDIRFARLSTIKNLLVGDTLSGCWATVGVLTEKGIPRTSSTGKTYCIWKISCLDENTISVFLFGDAYKRNCNEPAGTVFALFNASVRKDAVGTGFSLSVYQSSHILKMGTSDDYGVCKGKTKDGVACTVIINRRRGIYCKYHKSKVSEKYSTTMRTELKGGNLRTGFRDHLKSEGIYLVDPLANKTNSKKPALPVKLLSVEGLKKALSNADKVTTNVHSQGKRFLAEITGKTSHKDATQNHQKISSEKRKPSTVKMDSEVIENQKQDPKRKKTEHVLADKMKKNSGKMIELDYVSSDDEETGFYFPDKPTGAL 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 49396623 49401343 + evm.model.ptg000010l.949 HCH2g0555 539780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0555 422 MobiDBLite consensus disorder prediction 1 16 - -
HCH2g0555 422 MobiDBLite consensus disorder prediction 340 384 - -
HCH2g0555 422 PANTHER PROTEIN MCM10 HOMOLOG 7 386 IPR040184 GO:0003688(PANTHER)|GO:0003690(InterPro)|GO:0003697(InterPro)|GO:0003697(PANTHER)|GO:0006270(PANTHER)|GO:0006270(InterPro)|GO:0043596(PANTHER)
HCH2g0555 422 MobiDBLite consensus disorder prediction 23 50 - -
HCH2g0555 422 FunFam DNA replication licensing factor mcm10 79 253 - -
HCH2g0555 422 Pfam Primase zinc finger 218 260 IPR015408 GO:0005634(InterPro)|GO:0006260(InterPro)
HCH2g0555 422 MobiDBLite consensus disorder prediction 1 51 - -
HCH2g0555 422 Pfam MCM10 OB-fold 89 215 IPR055065 -
HCH2g0555 422 Gene3D - 78 252 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0555 K10736 - csv:101219022 587.03