Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0636 ATGGGATATTGCAAGGATCAGAAACCACAACAAGAAGCTTACATTGTTTACTTTGGAGAACACAGTGGAGAGAAAGCGTTACATGAAATAGAAGCAAATCATCACTCTTATTTGCTTTCTGTTAAAGATGACAATCAAGAAGATGCCAAGTCTTCTCTTCTTTATAGCTACAAACACACCATCAATGGCTTTGCTGCTCTTCTTACGAAACAACAAGCTTCCAAACTCAAAGGCGTTGAACAAGATGAACCAAAACCTAATGACTTGGTTTCCCAAGCTCAACATGGAAAAGATGTCATCGTTGCCATTATGGATAGCGGTGTGTGGCCAGAATCTAAAAGTTTTAGTGATGGAAAGATGGGACCCATTCCAAAATCATGGAAGGGAATTTGTCAGACAGGAACTGCTTTTAATGCATCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTCAGTGGTTATGAGAGCTTTCACGGTCCTCTTAATGAGACACAAGACTACAAATCTCCCCGTGACAAAGATGGTCATGGATCTCACACAGCTTCAATTGTCGGTGGTCGAAGAGTCCATAATGTCTCTGCTTTTCACGGCGTTGCTAGCGGCACCGCTTCTGGTGGCGCTCCAAATGTGAGACTTGCCATATACAAAGTCTGTTGGGCAGCTCCCAATCAAATGAAAGCCAATGGAAACACTTGCTTCAACACAGACATACTGGCTGCCATGGATGATGCCATTGCTGATGGGGTTGATGTTATGAGCTTATCACTTGGAACTGCTAACCATACCAGTTATATGGAAGATGCTGTTGCTATTGGAGCATTGCATGCCCTTAAGAAAGACATTGTAGTGTCTGCTAGTGCCGGCAACTTTGGTCCTATTCCTTCCAATTTGGCTAATGTTGCTCCATGGATCATAACTGTTGGAGCTAGTACTATAGACAGAGAATTTTACTCTAATGTTGTTCTAGGAAATGGACTGAACATCGAGGGAATGTCAATGTCTCCATTGAAGATGGACAACGAGATGTATCCATTAGTATATGCAGGTTATATTTCTAATGAAAATGTAACCCAATACCAAACAGGACAGTGCCTTCCAAACTTTCTTTCACCCGAAAAAGCAAAGGGGAAGATAGTATTATGCATGAGAGGAATGGGAGAAGAAATATATACCAGTAGCTTGGAAGTGAAAAGGGCTGGTGGAGTTGGAATGATATTAGCAGATATCCCACAACTTGGAAGCAAGCCATATAGTTATCCTCATTTTCTTCCTGCCACGGTTGTGTCTTATGATGATGCAAACACCATCATGAATTACATTGGCACTTGCAATTGTATGCACCCAAAGGCAAACATTCTTCCGCCAACCACCGTGTATGGCTCCAAGCCGGCTCCACAAATGGCTGAGTTTTCAAGTAGAGGTCCTAATACTATTGACCCCTACATCCTCAAGCCTGACATAACAGCTCCAGGAGTTAATATATTAGCAGCATGGACTGAAGAGGATTCACCCACAAGGCTACCGCGAGATATAGATTCTCGAGTTGTTCAATACAATCTGTTTTCTGGAACCTCAATGTCTTGCCCACATGTATCTGCTGCTGCAGCCCTTCTTAAAGCCGTTCACCCTGATTGGAGTAGTGCTGCTATAAGATCTGCCCTCATGACGACCGCTACAACAACCGACTCAACGGGTTCATTGATGACCGAAGAAATAGATGGCAGCTTAGTAACTCCATTTGCATATGGGGCCGGCCACTTCCTACCCTCATTGGCAGCCGACCCTGGCCTAGTATATGATGCAAACTACACACACTACCTTGACTACCTATGTAGCCTTGGGATGAACAATACTGATACAACATTCAAGTGTCCATCGGAAGTTGCTCCTTCATACAACCTCAATTACCCTTCAATCGCAATCCCGAATTTCAGAGGGTCGGTGAGAGTGGAAAGGACTGTTACAAATGTTGGTGGAAACAACACAGTGTATTACTTCTATAGTGACCCACCAACAGGAATTACAATAACATCTTCACCAAATGTCTTGGAATTTGATAAAGTTGGTCAGAAGAAGAACTTCACCGTAACAGTCGCCGGACACGGGCTAATCGAAGTTGATCAAAACGGACACTCTTTTGGTTGGTACACTTGGAGTGATGGAGTCCACAACGTCAGAAGTCCGATTGCACTCTCCTTTACTTAA 2211 43.19 MGYCKDQKPQQEAYIVYFGEHSGEKALHEIEANHHSYLLSVKDDNQEDAKSSLLYSYKHTINGFAALLTKQQASKLKGVEQDEPKPNDLVSQAQHGKDVIVAIMDSGVWPESKSFSDGKMGPIPKSWKGICQTGTAFNASHCNRKIIGARYYLSGYESFHGPLNETQDYKSPRDKDGHGSHTASIVGGRRVHNVSAFHGVASGTASGGAPNVRLAIYKVCWAAPNQMKANGNTCFNTDILAAMDDAIADGVDVMSLSLGTANHTSYMEDAVAIGALHALKKDIVVSASAGNFGPIPSNLANVAPWIITVGASTIDREFYSNVVLGNGLNIEGMSMSPLKMDNEMYPLVYAGYISNENVTQYQTGQCLPNFLSPEKAKGKIVLCMRGMGEEIYTSSLEVKRAGGVGMILADIPQLGSKPYSYPHFLPATVVSYDDANTIMNYIGTCNCMHPKANILPPTTVYGSKPAPQMAEFSSRGPNTIDPYILKPDITAPGVNILAAWTEEDSPTRLPRDIDSRVVQYNLFSGTSMSCPHVSAAAALLKAVHPDWSSAAIRSALMTTATTTDSTGSLMTEEIDGSLVTPFAYGAGHFLPSLAADPGLVYDANYTHYLDYLCSLGMNNTDTTFKCPSEVAPSYNLNYPSIAIPNFRGSVRVERTVTNVGGNNTVYYFYSDPPTGITITSSPNVLEFDKVGQKKNFTVTVAGHGLIEVDQNGHSFGWYTWSDGVHNVRSPIALSFT 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 50157575 50160618 + evm.model.ptg000010l.868 HCH2g0636 539861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0636 736 FunFam Subtilisin-like protease SBT1.5 98 326 - -
HCH2g0636 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 731 IPR045051 -
HCH2g0636 736 Pfam PA domain 345 438 IPR003137 -
HCH2g0636 736 Pfam Subtilase family 96 566 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH2g0636 736 Gene3D Peptidase S8/S53 domain 98 608 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH2g0636 736 FunFam subtilisin-like protease SBT1.5 315 461 - -
HCH2g0636 736 ProSiteProfiles Serine proteases, subtilase domain profile. 73 596 - -
HCH2g0636 736 SUPERFAMILY Subtilisin-like 90 599 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH2g0636 736 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
HCH2g0636 736 PRINTS Subtilisin serine protease family (S8) signature 174 187 IPR015500 -
HCH2g0636 736 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
HCH2g0636 736 Pfam Peptidase inhibitor I9 14 77 IPR010259 -
HCH2g0636 736 CDD Peptidases_S8_3 82 557 IPR034197 -
HCH2g0636 736 CDD PA_subtilisin_like 321 444 - -
HCH2g0636 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
HCH2g0636 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 3 91 IPR037045 -
HCH2g0636 736 Gene3D - 315 461 - -
HCH2g0636 736 Pfam Fibronectin type-III domain 635 732 IPR041469 -
HCH2g0636 736 Gene3D - 612 735 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0636 HCH-Chr2:50157575 HCH9g1349 HCH-Chr9:44535517 0.00E+00 dispersed
HCH14g1025 HCH-Chr14:37448572 HCH2g0636 HCH-Chr2:50157575 1.60E-293 transposed
HCH2g0636 HCH-Chr2:50157575 HCH6g0900 HCH-Chr6:43769229 5.70E-144 wgd
HCH2g0636 HCH-Chr2:50157575 HCH7g0364 HCH-Chr7:2629960 1.60E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0636 - - - 0.0