Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0701 ATGCCAAAGGGTTTGAAGAGCCAGTGCCAGTCTACTTCTCATGAGCTTTTGAAAGAAAAAGCGAAGAATCGTGTTAATGACCTTCAAGGGTTGTTCACTAATCTTCAATCAGCAAGGAAGGAGAGTCGTACTAATGATGTTGCTGTATTCGAAGAGCAAGTGATTCATATGCTCAGGGAGTGGAATGCTGAGCTCAATGAGCCATCGCCTGCTTCTTCGTTATTTGGTGGCAGTCATGGATCATTCTCGGAGGAATTAGCCCGTCTTCTTGGGCATTGTGATGAGGAAGATGATGCGACTAGTACATTGGCTGGACCAAAGCCTGAGCCTGATTTTCAATGCCTTCATGTCAGCAATTTGTTGGATCTTCAGCATGTGGAGCTCCAACATGGTTTCCCTGGATTTGAAGAAAGCAAGGTTTCTGCTTCAAATCAGCAGAATTATATGTTATTTAAGTCAGATATGACTAGTCATTCTGATTGTCAAAATTTCAATTTATATCAGAACTTTGAGCAGAACATGGTGGCTGGTAAGGATGATATGTCTAATTTGGATTGCCATATATTGGATTCAAATCAAGACTTCGATTATGGGCTTCTTTCTGAGGCATATGAGGCTGGAAACTTTATCCAGGACACAAAGCCCAGCATTCTTCCAGATATCTCACCCCCACCATCTGCTTATATGGGGCCAATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCTAAATTGTGCCAGGACTATTGCAGTAGCTCTCATTCTATTCTTGCATTAAATGAAGGCCTTCTAGGAATGCCTCCAATTTTGCGTCCTGGAGGCATTGGCTTGAAGGATGGTCCACTCTTTGCTGCTCTTCATGCAAAGACAGAGGCTAAAGAAGTTGGAATTCCTACATGTGACGGTGCTGCATCTATGAAATCTCCATGGAATGCTCCTGAACTGTTTGATATTTTATTACTTGAAGGTGAGACAATCAGGGAATGGCTTTATTTTGACAAGCCTAGACGGGCCTTTGAGAGTGGCAATAGAAAGCAAAGGTCATTGCCAGATTATAGAGGCCGTGGTTGGCATGAATCAAGAAAGCAGGTGGTGAAGGAGTTTGGTGGACATAAGAAGTCATATTACATGGATCCACAGCCATCGAACTCCCTTGAATGGCATTTATATGAATATGATATCAGCAATTACGATTCATTTGCATTATACAGGCTGGAACTCAAGCATGCCGATACAAAGAAGAGTCCCAAGGGGAAAGTGACCACCGATCCTCTTGCTGATCTGCAGAATAAGATGGGGAAGCTTACTGCAGAGGGACCTGTTGAGCTTGGACAATCAGTTAAGGGCAAGACGAAGGCTAATAAAAAGGCTGATATTGTAAATAAGGATCTTGTTCTCTGTCAACAGGATACCTCTATAACTGAAGCATCTAATATTGGTAAAGATGCTGATGTAATCAGCATACCATCTGGTCCCAACTGA 1488 42.67 MPKGLKSQCQSTSHELLKEKAKNRVNDLQGLFTNLQSARKESRTNDVAVFEEQVIHMLREWNAELNEPSPASSLFGGSHGSFSEELARLLGHCDEEDDATSTLAGPKPEPDFQCLHVSNLLDLQHVELQHGFPGFEESKVSASNQQNYMLFKSDMTSHSDCQNFNLYQNFEQNMVAGKDDMSNLDCHILDSNQDFDYGLLSEAYEAGNFIQDTKPSILPDISPPPSAYMGPICALWDCFRPAQGSKLCQDYCSSSHSILALNEGLLGMPPILRPGGIGLKDGPLFAALHAKTEAKEVGIPTCDGAASMKSPWNAPELFDILLLEGETIREWLYFDKPRRAFESGNRKQRSLPDYRGRGWHESRKQVVKEFGGHKKSYYMDPQPSNSLEWHLYEYDISNYDSFALYRLELKHADTKKSPKGKVTTDPLADLQNKMGKLTAEGPVELGQSVKGKTKANKKADIVNKDLVLCQQDTSITEASNIGKDADVISIPSGPN 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 50798410 50800936 + evm.model.ptg000010l.803 HCH2g0701 539926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0701 495 Coils Coil 18 38 - -
HCH2g0701 495 PANTHER TRANSCRIPTION FACTOR VOZ1 1 475 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(InterPro)|GO:0048578(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0953 HCH-Chr14:37046434 HCH2g0701 HCH-Chr2:50798410 9.60E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
33178 None None None None HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0701 - - - 0.0