Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0759 ATGGTGATTTGGAAAGAAATGGAATTGAGAAGAGCTGGTTATGTTGTCATTTTTGTGATTCTGCTATGTGCATTGGCAATTGCAAGTTCAGAGGGAAGGAGGAAGACGATCCAAATGGTTATCGACAATGGAAACGGCAATGGCTGTGGCTGTCGATTGACGTCGGAGCATACGGTTGAGCAAGAGATGAAAGGATCAGTAGATAGGGAATATGCAGCTGCGGAATTTGTTCCTCACAACCCGAAAGAGCAGATGCTTGAAGAAGCTATCAGAATTCTGCCTCCTAAGAGGAAGCAAGGATTTTCAGATTGTTTAAGAAAGAAAACAGTGCTGTTTCCTGCCTCTGGGGGACTTTCTAGCTTTAATGATTGGTTTATCAGGTTAGTTGAGTTTCTCTTTGGGGGGCCGGAGCCGCATATTCCTAGGAGATTTCTGATTAGTTACTCAAATCACCGTATGCTACCACCGCACTCTGCTGCAGCTCGAGCTCCACTTCGTACATCAGCGTCACTGGTATCATCGTCACCGAGGCATGCCCCATTGTCATCACCAAGCAATGTTCCATCACCCTCTACTACACCCCTACCCAACTCTCCATCATCAAATCTTCATCCCCCCACGTCGTCACCACTCAATGCAGATGTCTTTGATTCACCTCCAACTCGACATGTCCCTCCCTCGCCTCGCCCATCAAGAAAGCATGATAACAGCCAGATTGTCATGGTTTCTGCTTCTGTAGCAGCCGCTGTAGGACTTACCGTTGTCATTGCCCTGCTTTTGTTTTGCTGTCGTAATGGTGGTAGTAATAAAGTTGATCCGAAGGATGGGCAAAAGGATGAACGACCTCTTCTCAACATATCATTGAGTGAATTATCAGGAGGTTCTTCACAGAAGTCTTACAGCTTGCGGAATTCAACTACTAAAGAGTTCAATGCTAGTAATGGAAATAAATTAACCTCTTTAGCTAGCCACTTGGCAATGAATTCTGATGGTACCTCTAAGGCTGAGGCTCCAACATCTGAAGATACAACAGCAACATTGCCTCCTTTGAAACCACCCCCTGGAAGATCAGATCCCCAGCCTCCTCCACCCGCACCTGCACCGCCACCCCCTCCTGCTCCTAGGGCTCCACCCCCACCGCCCATGAAAGTCGTTCGGCCTCCACCTGTCCCACCATTGGGAAGGCCTGGTAAATCTCCACAATTGCCTAAGGCACCACATAGTCGTGGACCTAGTGGTTTAAGTTTTGATGGGGATCCAGGAACTCAAAAGACCAAGTTAAAGCCATTCTTCTGGGATAAGGTTCTTGCCAACCCTGACCAATCCATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAATTCAATGAGGAGATGATGGAGTCTCTGTTTGGATATGCGACTGGGGATAATAGCAAAAGCGACCGAAAGAAAGACTCGACTTCGGAACCTTCAATACAGTACATAAAAATTATTGACGCTAAGAAAGCTCAAAATCTTTCAATTCTTCTACGAGCACTGAATGTGACGACAGAAGAAGTTGTGGATGCCCTTCAAGAAGGAAATCCTGAGCTTCCAGTGGAGCTCCTGCAAACCTTGTTGAAGATGGCACCAACGTCTGAAGAAGAACTGAAATTGAGGTTATTCACAGGTGAACTTTCTCAGTTAGGTCCTGCTGAACGGTTCCTTAAAGTCTTGGTGGATATCCCGTTTGCTTTTAAACGATTAGAGTCTATTCTCTTCATGCTCACCATGGAGGAAGAAGTCTCTAACATTAAAGAGTCTTTCGTAACTCTAGAGGTTGCCTGCAATGAACTCAGAAATAGCAGGCTATTTCTGAAGCTGTTAGAAGCAGTTCTCAAAACTGGCAATCGGATGAATGATGGAACTTACCGTGGTGGTGCGCAGGCATTTAAGCTTGATACGCTCTTGAAACTGGCTGATGTTAAAGGAACCGACGGCAAAACTACGCTCTTGCACTTTGTTGTCCAAGAAATCATCCGTTCAGAGGGCGTACGAGCGGCCCGCTCAATAAGAGAAAGTCGAAGCGCGTCCAGTGTAAACTCCAATGATGGAAATTTCGAAGACTTGGCGGATGATTCAGCAGAAAATTATCGCCAATTGGGTCTTGAGGTCGTTTCTAGTTTGAGCTCGGAGCTTAAAGATGTTAAAAGGGCAGCAGCCATTGATGCCGATAGCATAACGGCCACGGTATCAAAACTCAGTCAGTCACTTTTTCAAACCACAGGATTTTTAAACGCCGAGATGAAGAGTTTGGACGAGGACAGCAAATTCCATCGATCATTGGTTGAATTTGTGGAGAAAACAAAAGCAGATATTTCATGGATATCAGAGGAAGAAAAGAAGATAATGTCGCTAGTAAAGAGCACGGCAGATTACTTCCATGGAAATGCTGGAAAGGATGAAGGACTGCGTTTGTTTACAATTGTACGTGATTTCTTAATTGTGTTAGACAAGACATGTAAACAGGTTAAAGAAGCAGCTGCAGCAAAGCAAGTAAGGAATTCCAAGAAAGAAACTCCAACATTGTCAGCTTCTTCTCTGCAGAGTCCAGATATACGGCGACGGCTGTTTCCTGCGATTGCAGAACGACGAATGGACGAGGATTCCAGTTCTTCAGACGACGAGAGTTCATCTCCAGTATCACCATCACCATCATCCTAG 2685 45.51 MVIWKEMELRRAGYVVIFVILLCALAIASSEGRRKTIQMVIDNGNGNGCGCRLTSEHTVEQEMKGSVDREYAAAEFVPHNPKEQMLEEAIRILPPKRKQGFSDCLRKKTVLFPASGGLSSFNDWFIRLVEFLFGGPEPHIPRRFLISYSNHRMLPPHSAAARAPLRTSASLVSSSPRHAPLSSPSNVPSPSTTPLPNSPSSNLHPPTSSPLNADVFDSPPTRHVPPSPRPSRKHDNSQIVMVSASVAAAVGLTVVIALLLFCCRNGGSNKVDPKDGQKDERPLLNISLSELSGGSSQKSYSLRNSTTKEFNASNGNKLTSLASHLAMNSDGTSKAEAPTSEDTTATLPPLKPPPGRSDPQPPPPAPAPPPPPAPRAPPPPPMKVVRPPPVPPLGRPGKSPQLPKAPHSRGPSGLSFDGDPGTQKTKLKPFFWDKVLANPDQSMVWHEISAGSFQFNEEMMESLFGYATGDNSKSDRKKDSTSEPSIQYIKIIDAKKAQNLSILLRALNVTTEEVVDALQEGNPELPVELLQTLLKMAPTSEEELKLRLFTGELSQLGPAERFLKVLVDIPFAFKRLESILFMLTMEEEVSNIKESFVTLEVACNELRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGVRAARSIRESRSASSVNSNDGNFEDLADDSAENYRQLGLEVVSSLSSELKDVKRAAAIDADSITATVSKLSQSLFQTTGFLNAEMKSLDEDSKFHRSLVEFVEKTKADISWISEEEKKIMSLVKSTADYFHGNAGKDEGLRLFTIVRDFLIVLDKTCKQVKEAAAAKQVRNSKKETPTLSASSLQSPDIRRRLFPAIAERRMDEDSSSSDDESSSPVSPSPSS 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51235032 51238504 + evm.model.ptg000010l.745 HCH2g0759 539984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0759 894 MobiDBLite consensus disorder prediction 347 399 - -
HCH2g0759 894 SUPERFAMILY Formin homology 2 domain (FH2 domain) 368 840 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 287 315 - -
HCH2g0759 894 PANTHER FORMIN-RELATED 146 883 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
HCH2g0759 894 MobiDBLite consensus disorder prediction 187 203 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 288 315 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 864 879 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 838 894 - -
HCH2g0759 894 ProSiteProfiles Formin homology-2 (FH2) domain profile. 417 850 IPR015425 -
HCH2g0759 894 Gene3D Formin, FH2 domain 423 854 IPR042201 -
HCH2g0759 894 SMART it6_source 417 839 IPR015425 -
HCH2g0759 894 MobiDBLite consensus disorder prediction 167 186 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 329 346 - -
HCH2g0759 894 Pfam Formin Homology 2 Domain 420 823 IPR015425 -
HCH2g0759 894 MobiDBLite consensus disorder prediction 842 858 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 329 422 - -
HCH2g0759 894 MobiDBLite consensus disorder prediction 161 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0759 HCH-Chr2:51235032 HCH5g0214 HCH-Chr5:1215988 4.40E-98 dispersed
HCH1g0118 HCH-Chr1:8760457 HCH2g0759 HCH-Chr2:51235032 1.60E-100 transposed
HCH2g0022 HCH-Chr2:941933 HCH2g0759 HCH-Chr2:51235032 1.20E-103 transposed
HCH8g0107 HCH-Chr8:4309375 HCH2g0759 HCH-Chr2:51235032 3.50E-98 transposed
HCH12g1149 HCH-Chr12:9578757 HCH2g0759 HCH-Chr2:51235032 9.40E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0759 K28090 - csv:101206094 723.391