Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0775 ATGGCAGCTAGTTTTTCAAGCAGCAACCTGTTGGTTTTCTCCCGCCTATGCACGTATTATTGGTCCTTGTTATTATTATTATTATTGTTTTTTCCTGCTAATGGCGACATTAAAATCATCCTAACCGACAGCCCAGATAGAAATTCATCTCTTTTTTCAGCTGAAAAGAGATTTGAACTTGGTTTCTTCTCTCTGAAAAACAAAATTTTTCTGGGAATATGGTTTTACTGTTCCAAACGAGAGGCTATAGTGTGGGTTGCCAACCGAGATAACCCGTTATCGAGCAGAAATGGCGTTTTAGCCATCACAGAAGATGGAAATCTCAATATCTTGGAATCATCCAACCATTTTCATTTGATTATTACTAACGTTGTAAAAGGGTCTCCAAGCAATAGAACGGTGAAGCTCATGGATTCTGGTAATTTAGTTCTAAGTGAAGGAGATAGATATTTATGGCAAAGCTTTGACAATCCAACGGATACTTTTCTTCTGGGCATGCAGGAAAACTCACAACTGACTTCATGGAAAAGTGCAGACGACCCATCGATGGGGCAGTTTACGTTCAAGAAAGGACAAGAAACGAATCAATTCATAATTGAGAAAAGAGAGAGACATGTACCATTTTGGAAAAGTTGTGGTGTATGGGAAAATGACGATCGAATGCCTCCCAGAGTGAAAAAGTTACTGCTCTCGAATTTGAAGCCACGGGAACATAGCAACAATCCCACAAGATTTGGCCTTCGAGAGATACATTACGGGGCACCAAGATTTGATGATCCACAGTTTGATTATAACTATACAAGATTGGTGATGAATTTCAGTGGGAAGATAGAATTCATGGTGTGGAACAAGACGAGTGGCACGTGGTATCCGTTCTGGTCCCAACCAGAAGACAGATGTAGTTTGTTCAAAGCCTGTGGGAGCTTTGCTACTTGCAGCAGCGAAAGTTGGCGGAAGTGCTGGTGTTTGCCTGGTTTTGAGCCGAGGGCGAAGGATAAATGGGATTCTGGTCATTTCTCAGACGGATGCAAAAGAAAATCAGAAATTTGCACAGAGGGAGGGGAAGCTACATTCCTGAGGCTAAATGTAAAACTAGGGAAGAGAGAGGAAGAGTATGACGTGGAGAACAATACGAGTTGCCAATCAAATTGCGAATCAGAGAGTTGTCAGTGTAATGCTTATTCAGAAACCACTGCCACTAGAAAAAACAATGTTACGTGCTCCATTTGGACGGATGATCTCCAAAACATCTTGCAAAATGCAGACAGTCGTAGTAATGTCCATGTCCATGTGGCCAGTCGTGATATAGAGTTTACAAAGCGAGATTGTGGGATCTGCGGGACCAACATTATCCCATATCCTCTAAGCACTGGGCCCAACTGCGGTGATCCTACATACCGTAACTTCAGCTGCGACGGTTCGGCAGGTCGGGCTTCCTTCTATGCAGCAGGCGTTTCATATAATGTCACCGGCGTCGACCCCGAAGGAAAACTTTTTGCAATCTTGGTGAATAAATCTCTCTGTGGAGTTATTGAAAAGGTTCTGAATTTGGACCAAGCTTATGTATTCAATGGAACCAAAGGTTGTGACTCTGGCTCCATCAACTCCAGCTCAAATCCTTTGATGGAAGAGCTAGAATTTGCTGAAGTTGAAATTTTATGGAACAAAGCATTAGAGCCAATCTGCAATTCATTAACAGACTGCAACGATTGGCCAAATTCTATATGCAGCTCATCAGCACCAATAAAACGTTGCTTATGCAATGCTTCTCTTGGATGGGATGGAACCAAATGTACTAATGCTTCAACCCTTGCTATCAATTCATTGCGTCATGAAGCTGTGGAAAAACAGAGGAATTTTTCTGTTGTTCTCGTTGTCCTATTCGCCATTGCTACGTTCATCGCTAGTTCCTGCTTAGCATTTTATATTTATCAAAGAACAAGGAAAGAAGAAATTCAACAAGACAACCGATCAAACGATTGGCGAAGTCGGGAAATTCAACTGTATTACAGCGAGAAGCGCGTCAAAGACTTTATAGAATCAGGTGAGTTTGGAGAAGATGACAGGAAAGCCATAGATGTACCAGTCTTTGATTTGGACACCATACTTGGTGCAACTGACAATTTTTCTGAAGAAAACAAAATTGGAAGAGGAGGATTTGGAGTAGTTTATAAGGGAAAATTTCCAGGAGGACTAGAAATTGCAATAAAAAGGCTGTCAAAGGGTTCAACACAAGGGGTAGATGAATTCAAGAATGAGGTGATTTTGATTGCAAAACTTCAGCATAGGAATCTTGTTAGGCTTTTGGGGTACTGTGTTGCAGGAGATGAAGTAATGTTGCTCTATGAATATATGCCCAACAAAAGCTTAGATTCCTTCATATTTGATAGAACACTCTGTTTGATGTTGAAATGGGAGGCGCGGTTTAACATCATATTGGGGTTTGCTCGAGGTCTACTTTATCTTCATGAAGATTCGAGGTTGAGAGTTATTCATAGAGATTTGAAAACAAGCAATATTCTACTTGATGCACATATGAATCCAAAAATTTCTGACTTTGGTTTGGCGAAAATTTTTGAGGGCCAACAAACTGAAGGAGCTACCCGAAGAGTTGTTGGAACTTATGGCTACATGTCACCGGAATATGCCTTGGACGGATTTTTCTCAGTGAAGTCTGATGTATTTAGCTTCGGTGTTGTCGTGCTCGAAATCGTCAGCGGCAAAAGGAACACCGGGTTTTACCAATCGATTCAAGCTTTAAGTCTTCTCGGACATGCTTGGAAATTGTGGACAAACAAGACACCATTGGAGATTACAGACCAAGTCTTACGAGAATCTTGCAATCCAGACGAAGTAATAAAGTGCATTAATGTGGGATTATTATGTGTTCAAGAAGACCCAGCTGATCGCCCGACCATGTCAAATGTAGCTTTTATGCTTAGCAGTGGTTGTGACAATGCTTCTCTTCCAAATCCTAGACAGCCAGCTTTTGTAGCGACAAGATCTTCGAGTCTTTCCACTGCTGCTTCGTCTTCTAGTTTTAAACCTGAAATTCATAGCGAGATTAGCTTGCTAGAGCCTCGGTAA 3087 41.4 MAASFSSSNLLVFSRLCTYYWSLLLLLLLFFPANGDIKIILTDSPDRNSSLFSAEKRFELGFFSLKNKIFLGIWFYCSKREAIVWVANRDNPLSSRNGVLAITEDGNLNILESSNHFHLIITNVVKGSPSNRTVKLMDSGNLVLSEGDRYLWQSFDNPTDTFLLGMQENSQLTSWKSADDPSMGQFTFKKGQETNQFIIEKRERHVPFWKSCGVWENDDRMPPRVKKLLLSNLKPREHSNNPTRFGLREIHYGAPRFDDPQFDYNYTRLVMNFSGKIEFMVWNKTSGTWYPFWSQPEDRCSLFKACGSFATCSSESWRKCWCLPGFEPRAKDKWDSGHFSDGCKRKSEICTEGGEATFLRLNVKLGKREEEYDVENNTSCQSNCESESCQCNAYSETTATRKNNVTCSIWTDDLQNILQNADSRSNVHVHVASRDIEFTKRDCGICGTNIIPYPLSTGPNCGDPTYRNFSCDGSAGRASFYAAGVSYNVTGVDPEGKLFAILVNKSLCGVIEKVLNLDQAYVFNGTKGCDSGSINSSSNPLMEELEFAEVEILWNKALEPICNSLTDCNDWPNSICSSSAPIKRCLCNASLGWDGTKCTNASTLAINSLRHEAVEKQRNFSVVLVVLFAIATFIASSCLAFYIYQRTRKEEIQQDNRSNDWRSREIQLYYSEKRVKDFIESGEFGEDDRKAIDVPVFDLDTILGATDNFSEENKIGRGGFGVVYKGKFPGGLEIAIKRLSKGSTQGVDEFKNEVILIAKLQHRNLVRLLGYCVAGDEVMLLYEYMPNKSLDSFIFDRTLCLMLKWEARFNIILGFARGLLYLHEDSRLRVIHRDLKTSNILLDAHMNPKISDFGLAKIFEGQQTEGATRRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIVSGKRNTGFYQSIQALSLLGHAWKLWTNKTPLEITDQVLRESCNPDEVIKCINVGLLCVQEDPADRPTMSNVAFMLSSGCDNASLPNPRQPAFVATRSSSLSTAASSSSFKPEIHSEISLLEPR 1028
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51402848 51406817 - evm.model.ptg000010l.729 HCH2g0775 540000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0775 1028 Pfam D-mannose binding lectin 83 170 IPR001480 -
HCH2g0775 1028 Pfam Protein tyrosine and serine/threonine kinase 712 977 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH2g0775 1028 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 785 988 - -
HCH2g0775 1028 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 180 IPR036426 -
HCH2g0775 1028 SMART serkin_6 709 979 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH2g0775 1028 Gene3D Transferase(Phosphotransferase) domain 1 785 991 - -
HCH2g0775 1028 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 41 995 - -
HCH2g0775 1028 MobiDBLite consensus disorder prediction 1006 1028 - -
HCH2g0775 1028 CDD B_lectin 48 158 IPR001480 -
HCH2g0775 1028 ProSiteProfiles Bulb-type lectin domain profile. 36 157 IPR001480 -
HCH2g0775 1028 Gene3D - 38 156 IPR036426 -
HCH2g0775 1028 ProSiteProfiles PAN/Apple domain profile. 350 443 IPR003609 -
HCH2g0775 1028 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 674 784 - -
HCH2g0775 1028 ProSitePatterns Protein kinases ATP-binding region signature. 715 737 IPR017441 GO:0005524(InterPro)
HCH2g0775 1028 ProSiteProfiles Protein kinase domain profile. 709 997 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH2g0775 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH2g0775 1028 Gene3D Phosphorylase Kinase; domain 1 677 784 - -
HCH2g0775 1028 SUPERFAMILY Protein kinase-like (PK-like) 694 991 IPR011009 -
HCH2g0775 1028 CDD STKc_IRAK 715 980 - -
HCH2g0775 1028 Pfam S-locus glycoprotein domain 263 329 IPR000858 GO:0048544(InterPro)
HCH2g0775 1028 SMART blect_4 42 158 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0775 HCH-Chr2:51402848 HCH7g0202 HCH-Chr7:1396888 8.80E-260 dispersed
HCH2g0774 HCH-Chr2:51395714 HCH2g0775 HCH-Chr2:51402848 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81325 PF00069 Pkinase 1.20E-44 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0775 - - - 0.0