Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH2g0905 | ATGCAGCAAGATCGTAAAAAGAGTTCAACAGAAGTGGAGTTTTTCTCTGATTATGGAGATGCCAGTAGGTACAAAATTCAGGAAGTTATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCAACCGACACTCGTACAGGTGAAAAAGTTGCGATAAAGAAGATACATAATATTTTCGAACATATATCGGATGCGGTTCGAATTCTTCGCGAGATAAAGCTGCTTAGACTTCTACGGCATCCTGATATTGTTGAAATTAAACACATTATGTTGCCACCTTCAAGGAGGGATTTCAAAGATATCTATGTTGTTTTTGAGCTGATGGAATCAGATCTTCATCAAGTTATTAAAGCCAATGATGATCTGACACGAGAGCACTATCAATTTTTTCTTTACCAGCTTCTTCGTGCGTTAAAATATATCCACACAGCAAATGTCTACCACCGAGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGCAAACTTAAAATCTGTGATTTTGGATTGGCGAGAGTTGCATTCAGTGACACACCAACAACAGTTTTCTGGACGGATTATGTTGCTACAAGATGGTATCGAGCTCCGGAGCTATGTGGTTCATTTTACTCCAGGTATACACCTGCAATCGATATATGGAGTATTGGCTGCATATTCGCCGAAGTATTAACAGGGAAGCCCCTTTTCCCCGGTAAAAATGTTGTTCACCAGCTTGATTTGATGACTGATCTTCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTAAGAAATGATAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCAGTGCCATTTGCTCAAAAGTTTCCAAATGCAGATCCTTTAGCCCTGAGGCTACTGGAAAGGTTGCTTGCTTTTGATCCAAAGGACAGGCCAACTGCTGAAGAGGCATTGGCTGATCCATACTTCAAGGGATTGTCAAGAATTGAGAGGGAACCTTCCTGCCAGCCAATTACAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTCACAAAAGATGACATTCAAGAGCTAATCTTCCGTGAGATTCTAGAATATCATCCTCAGCTACTTAACGACTACACAAATGGAACTGAGAGAACAAATTTTCTTTATCCAAGTGCTATAGACCAATTTAGAAAGCAGTTTGCACATCTTGAGGAAAATGGTGGTAAAAATGGGCCTGTTATTCCTCTTGAAAGAAAGCATGTCTCCCTCCCAAGGTCTACAGTTGTACACTCGAACACAATCCATTCTAAGGACCAACCAAATAATGTACCCTACAAAGACGTGCAGATCCCCGAAGATGCACACAGCAGGAATTCCCGAGATGGTGAAGGACGGTTAACCAATTCAAGGACCATGCAGGCACCACAAAAAATTCCATCAGCTAAGCCTGGAAGAGTAGTGGGACCAGTAGTAGCTGATGAAAATGGAAGGCTTTTGAAGGAACCGTACGATCCAAGAACGTTGATTAGAGGTGCCATTCTTCCTCCTGCATATTGTTACCAAAGATCTATAGCAGGCAATTTAGAAAGATCTGCAGCGGAAACAAAATTGGATATTTCATTGAGGGCCAAACAATCTTCCCAGTGTGGGATGGCATCCAAATTAGCACCAGACATAGCTATCAGCATTGACTCGAACCCCTTCTATATGATGCGTGCCGGAGTGAATAAAGTAGAACACAAGGACCAAATCTCCATAGATGCTAACTTTCTGCAGGCCAAGGTTGCCCAATATGGCGGTCTAAGTGCCGCAACTGCCACCACCGCATCAGTTGCTCACCGAAAGGTGGTTGCCAGCCAGTTCAGTGCGACAAAGATGTACTAA | 1848 | 41.88 | MQQDRKKSSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSATDTRTGEKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLSRIEREPSCQPITKMEFEFERRRVTKDDIQELIFREILEYHPQLLNDYTNGTERTNFLYPSAIDQFRKQFAHLEENGGKNGPVIPLERKHVSLPRSTVVHSNTIHSKDQPNNVPYKDVQIPEDAHSRNSRDGEGRLTNSRTMQAPQKIPSAKPGRVVGPVVADENGRLLKEPYDPRTLIRGAILPPAYCYQRSIAGNLERSAAETKLDISLRAKQSSQCGMASKLAPDIAISIDSNPFYMMRAGVNKVEHKDQISIDANFLQAKVAQYGGLSAATATTASVAHRKVVASQFSATKMY | 615 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 52532151 | 52536720 | - | evm.model.ptg000010l.599 | HCH2g0905 | 540130 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH2g0905 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 361 | - | - | |
HCH2g0905 | 615 | FunFam | Mitogen-activated protein kinase | 110 | 338 | - | - | |
HCH2g0905 | 615 | ProSiteProfiles | Protein kinase domain profile. | 24 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH2g0905 | 615 | MobiDBLite | consensus disorder prediction | 438 | 452 | - | - | |
HCH2g0905 | 615 | Pfam | Protein kinase domain | 24 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH2g0905 | 615 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 21 | 356 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
HCH2g0905 | 615 | SMART | serkin_6 | 24 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH2g0905 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 338 | - | - | |
HCH2g0905 | 615 | ProSitePatterns | MAP kinase signature. | 59 | 162 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH2g0905 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 319 | IPR011009 | - | |
HCH2g0905 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 30 | 54 | IPR017441 | GO:0005524(InterPro) | |
HCH2g0905 | 615 | MobiDBLite | consensus disorder prediction | 419 | 475 | - | - | |
HCH2g0905 | 615 | CDD | STKc_TDY_MAPK | 23 | 360 | - | - | |
HCH2g0905 | 615 | FunFam | Mitogen-activated protein kinase | 14 | 117 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH2g0905 | HCH-Chr2:52532151 | HCH8g1125 | HCH-Chr8:46964354 | 1.10E-193 | dispersed | |
HCH6g0615 | HCH-Chr6:36974428 | HCH2g0905 | HCH-Chr2:52532151 | 3.40E-219 | transposed | |
HCH6g1629 | HCH-Chr6:49363903 | HCH2g0905 | HCH-Chr2:52532151 | 1.80E-206 | transposed | |
HCH2g0905 | HCH-Chr2:52532151 | HCH3g0634 | HCH-Chr3:4412700 | 4.30E-44 | wgd | |
HCH2g0905 | HCH-Chr2:52532151 | HCH7g0055 | HCH-Chr7:379128 | 2.10E-253 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81331 | PF00069 | Pkinase | 4.00E-67 | CL0016 | HCH | PK |
Pathway information
