Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g0975 ATGGATCTCCTCCTTCTGGAGAAGACCTTGTTAGGTCTCTTCATCGCGGTAATTCTTGCTATCGCGATCTCGAAACTCCGCGGTAAAAAGTTCAAGCTCCCCCCGGGCCCGTTGCCAGTTCCGATATTCGGTAACTGGCTGCAGGTCGGGGACGACTTGAATCACCGCAACCTCACAGACCTGGCGAAGAAATTCGGAGACATATTCATGCTCCGTATGGGACAGCGAAACCTAGTCATCGTATCGTCTCCGGAGTTGGCGAAAGAAGTGCTGCACACGCAAGGCGTGGAGTTCGGTTCCAGGACGAGGAACGTGGTCTTCGACATCTTCACTGGGGAAGGACAAGACATGGTTTTTACAGTGTACGGAGAGCATTGGAGGAAGATGAGACGTATCATGACCGTTCCTTTTTTCACCAATAAAGTCGTGCAGCAGTACCGGTACGGATGGGAGGATGAGGCCGCACGTGTGGTGGAAGACGTCAGGAAGAACCCTGATGCCGCTACCAAGGGTATCGTTTTGAGGAAGCGGTTGCAGCTTATGATGTATAATAATTTGTACAGGATTATGTTTGACAGGAGGTTTGAGAGTGAAGACGATGCTCTGTTTAACAAGCTCAAGGCTCTTAATGGAGAGAGGAGCCGTTTGGCTCAGAGTTTTGAGTATAATTATGGCGATTTCATCCCTATTTTGAGACCCTTTTTGAGAGGGTATCTTAAGATTTGCAAGGAAGTTAAAGACAGAAGACTTCAGCTTTTCAAGGACTATTTCGTCGAGGAGAGGAAGAAACTTGCGAGCACGAAGGGTACAACAAATGAGGGATTGAAATGTGCGATCGATCATATATTGGATGCCGAACAAAAGGGGGAGATCAACGAAGACAACGTTCTTTACATTGTTGAGAATATTAATGTGGCAGCAATTGAAACAACATTGTGGTCGGTGGAATGGGGAATTGCTGAGCTAGTTAACAATCCGGAAATTCAGAAGAAGTTGAGGAATGAGCTTGATACAGTATTGGGACCGGGGGTTCAAATCACTGAGCCAGATACTTACAAACTCCCCTACCTACAAGCCGTGATCAAGGAGGCGCTCCGTTTGCGTATGGCGATTCCTCTTCTCGTCCCACACATGAACCTCCACGACGCGAAACTCGGAGGCTTCGACATCCCGGCCGAGAGCAAAATCTTGGTGAACGCATGGTGGTTAGCCAACAACCCCGCCAATTGGAAGGACCCTGAGCAATTCCGCCCTGAGAGGTTTTTGGAAGAGGAGTCCAAGGTTGAGGCCAATGGTAATGACTTCAGGTACCTGCCGTTCGGTGTTGGCAGGAGGAGCTGCCCCGGCATCATCTTGGCACTGCCAATTCTCGGTATAACGATCGGTCGATTAGTGCAGAATTTCGAGTTGTTACCGCCACCGGGACAGTCGAAGCTCGATACCACGGAGAAAGGTGGACAGTTTAGTTTGCATATATTGAAGCACTCCACCATTGTGTTGAAGCCAAGAGTATTCTAA 1518 48.75 MDLLLLEKTLLGLFIAVILAIAISKLRGKKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFMLRMGQRNLVIVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEDEAARVVEDVRKNPDAATKGIVLRKRLQLMMYNNLYRIMFDRRFESEDDALFNKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKDRRLQLFKDYFVEERKKLASTKGTTNEGLKCAIDHILDAEQKGEINEDNVLYIVENINVAAIETTLWSVEWGIAELVNNPEIQKKLRNELDTVLGPGVQITEPDTYKLPYLQAVIKEALRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPANWKDPEQFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKLDTTEKGGQFSLHILKHSTIVLKPRVF 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 53060292 53062599 + evm.model.ptg000010l.529 HCH2g0975 540200
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH2g0975 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 CDD CYP73 63 496 - -
HCH2g0975 505 Pfam Cytochrome P450 34 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 FunFam Trans-cinnamate 4-monooxygenase 23 497 - -
HCH2g0975 505 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH2g0975 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 503 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
HCH2g0975 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0202 HCH-Chr10:1637526 HCH2g0975 HCH-Chr2:53060292 9.80E-186 dispersed
HCH10g0203 HCH-Chr10:1641361 HCH2g0975 HCH-Chr2:53060292 1.10E-189 dispersed
HCH2g0975 HCH-Chr2:53060292 HCH9g1264 HCH-Chr9:36129205 9.20E-77 dispersed
HCH2g0975 HCH-Chr2:53060292 HCH3g1508 HCH-Chr3:53046371 5.50E-247 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g0975 K00487 - csv:101221846 917.146