Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH2g0980 | ATGTTGAAGAATAATATTCAAGCAGGAAAACCAAGCAACCTTCATGATTTCAACTCCGACTTTAGATACGCTGAAACCGATCCGACATGTCGTTACGGCCGCTTTGAAGAAGTTCTAGGCAAAGGGGCCATGAAAACAGTATACAAAGCAATTGATGAATTTCTAGGAATGGAGGTGGCATGGAGCCAAGTGAAACTAAACGAAGTCCTCCGATCGCCGGACGATTTGCAGCGGCTGTATTCGGAGGTTCATCTACTTAGCACACTCAAGCACGAATCGATCATGCGATTCTACACGTCTTGGATCGATGTCGATCGCAAGACGTTCAACTTCATTACCGAAATGTTTACTTCAGGAACACTTAGAGAATATGGAAAGAAATATAGGCGAGTTAACATGAGAGCTATTAAGAATTGGGCACGGCAGATTTTGAAGGGCCTCGTTTATTTGCATGAACATGATCCTCCAATAATACACAGAGACTTGAAATGTGATAATCTCTTTGTAAATGGTCATCTTGGGCAAGTCAAGATTGGTGATTTGGGGCTTGCAGCTATACTTCATGGTTCCAAATCTGCTCATAGTGTTATAGGTACACCGGAGTTCATGGCGCCGGAGTTATACGAGGAGGACTACAATGAGCTAGTTGATGTCTATTCATTTGGTTTGTGTGTTATGGAGATGCTTACTTCTGAATATCCATATAGCGAGTGTTCTAATCCTGCTCAGATATACAAGAAAGTCACATCAGGGAAGCTGCCAGCAGCATTGTACAAGATTCAAGACCTGGATGCACAGAGATTTATAAAGAAATGCTTGGTACCGGTTTCGATGAGAGCATCGGCAAAGGAACTATTACAAGATCCTTTCCTCATGGTTGATGGAGACAGACGTAATAATTTACCAAAGGAGAAGAATCAAGAGCAGAAGCCATTTCTAAATGCCAAAGAAATGGAGAAATTGCATCTGAATGAAGGTTTAAACAGGACCAATATGACAATCACAGGAAAACTGAATCCAGAAGATGATACCCTCTTTCTCAGAGTTCAAACTGCAGATAAAGAAGGTCCTCTGAGGAATATATACTTCCCCTTTGATATAGTGAATGATACTGCAATAGATGTGGCAATGGAGATGGTGAAAGAATTGGAAATTACTGATTGGGAGCCATTTGAAATAGCAGACATGATTGAAGGAGAGATATCTGCTTTGGTTCCAAATTGGAATAAAACACATGATCAGTCATCAAATCATCCCTTCAGCTTCAGCTATGCAGAAGAAGAAGATGACGATGAGAGGTCTCATCATACCTTCCGCTCTGTCTCCTCGTCTTCACAAGCTACGACATTAGGTTTCGTCGCCTCCCCACGGACAACTAATCAAAAGATATCAGATTGCTATAGTTGGTTCCAAGATGATGTGCATGATGACAGCAGTTCACAGAGCTCATCGCCATCCGGAAAATATTCAAACATGAATTACATAAGCAGTGACGAGTACGAGGCTCCGGTCCGAATAGATCAACATAACATCACCAAGATTCACAACTCCACAAGGTTTTGTCCCAATGAAAACCAAAACAGTAAGGATTTCTTGGCGGGAACTTTATATAAGCAAATTAGAGCTATGGAAGGATCATGTCAGGGAAATGGTTCTAGTCGTAAAGACAAGAGGGTAATGGATGGTCGGAGATTAACGAGGAATAGATCATTGGTTGATGTACACAGCCAACTATTGCACCGGTCATTGGTGGAGGAAGTGAGTAGAAGACGGTTGTTCAAGACGGTCGGAGCGGTGGAGAACATTGGTTTTCAAGCACCCTGTGACGTTTCTTCCGGCAGAAGAGTTTCTGACCGGGAGTTGGTCGGAAAACGAGGTGGTGGTGATGTGGGAATCAGGAGAAATCATGATTTGTAG | 1917 | 42.41 | MLKNNIQAGKPSNLHDFNSDFRYAETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGMEVAWSQVKLNEVLRSPDDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDRKTFNFITEMFTSGTLREYGKKYRRVNMRAIKNWARQILKGLVYLHEHDPPIIHRDLKCDNLFVNGHLGQVKIGDLGLAAILHGSKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGLCVMEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDLDAQRFIKKCLVPVSMRASAKELLQDPFLMVDGDRRNNLPKEKNQEQKPFLNAKEMEKLHLNEGLNRTNMTITGKLNPEDDTLFLRVQTADKEGPLRNIYFPFDIVNDTAIDVAMEMVKELEITDWEPFEIADMIEGEISALVPNWNKTHDQSSNHPFSFSYAEEEDDDERSHHTFRSVSSSSQATTLGFVASPRTTNQKISDCYSWFQDDVHDDSSSQSSSPSGKYSNMNYISSDEYEAPVRIDQHNITKIHNSTRFCPNENQNSKDFLAGTLYKQIRAMEGSCQGNGSSRKDKRVMDGRRLTRNRSLVDVHSQLLHRSLVEEVSRRRLFKTVGAVENIGFQAPCDVSSGRRVSDRELVGKRGGGDVGIRRNHDL | 638 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 53101309 | 53104606 | + | evm.model.ptg000010l.524 | HCH2g0980 | 540205 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH2g0980 | 638 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 296 | - | - | |
HCH2g0980 | 638 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH2g0980 | 638 | MobiDBLite | consensus disorder prediction | 413 | 442 | - | - | |
HCH2g0980 | 638 | FunFam | Probable serine/threonine-protein kinase WNK1 | 18 | 114 | - | - | |
HCH2g0980 | 638 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 114 | - | - | |
HCH2g0980 | 638 | ProSiteProfiles | Protein kinase domain profile. | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH2g0980 | 638 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 292 | IPR011009 | - | |
HCH2g0980 | 638 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 21 | 604 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
HCH2g0980 | 638 | FunFam | probable serine/threonine-protein kinase WNK9 | 116 | 296 | - | - | |
HCH2g0980 | 638 | CDD | STKc_WNK | 31 | 291 | - | - | |
HCH2g0980 | 638 | Pfam | Protein kinase domain | 36 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH2g0980 | 638 | SMART | serkin_6 | 33 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH2g0980 | HCH-Chr2:53101309 | HCH9g0831 | HCH-Chr9:5873604 | 2.00E-169 | dispersed | |
HCH2g0980 | HCH-Chr2:53101309 | HCH10g0772 | HCH-Chr10:7501607 | 3.30E-132 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81335 | PF00069 | Pkinase | 6.30E-48 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH2g0980 | K08867 | - | csv:101203757 | 999.964 |