Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH2g1250 | ATGAGTGCGTTGCACTTGCAATTGCCGCTTAGAATCGACGCCAATCTCGCATTTTGCCCATTCTGCCTTCCTTCTCTGAAACCCTCGTTATTAGTTCTTTCTCTACCAATCAAATTCTCACATCTCCGGAAAAAGCTCAAAACTTCACCAAATTCCCACAAAACCCATTTCTCATCTTTTACAATTGCTTCCATGGCCAATCCCGCAAGCTCAGAGACAGAGGCAAAGCCGTTTTCAGTCCTTTTTGTGTGCTTAGGCAATATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGAGACTTGGTCAATAAAAAGGGTCTCAATTCCAATTTCAATATTGATTCTGCTGGCACCATTGGTTTCCATGAGGGTGATGAAGCTGATCCAAGAATGAGGGCTACCTCTAAACGGCGTGGGATAGAGATAACGTCGTTATCGAGGCCGATTCGGCCTTCTGATTTTAAAGATTTTGATCTCATTCTTGCCATGGATAAGAAAAACAGAGAGGATATTTTGGGGGCTTTCAATCGGTGGAAACACAGGGAGACTCTTCCTCCTGATTCACATAAAAAGGTCAAATTAATGTGCTCGTATTGCAAAAAACATGATGAAACAGAAGTTCCGGATCCTTACTACGGTGGGCAACAAGGGTTTGAGAAGGTTTTAGACTTGCTTGAAGATGCCTGTGAATCTCTACTGGAAAGCATCTTGGCAGAGAACAAACACATTTCAGGTTCATGA | 741 | 43.18 | MSALHLQLPLRIDANLAFCPFCLPSLKPSLLVLSLPIKFSHLRKKLKTSPNSHKTHFSSFTIASMANPASSETEAKPFSVLFVCLGNICRSPAAEGVFRDLVNKKGLNSNFNIDSAGTIGFHEGDEADPRMRATSKRRGIEITSLSRPIRPSDFKDFDLILAMDKKNREDILGAFNRWKHRETLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISGS | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 54819068 | 54820811 | - | evm.model.ptg000010l.254 | HCH2g1250 | 540475 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH2g1250 | 246 | FunFam | Low molecular weight protein-tyrosine-phosphatase | 77 | 241 | - | - | |
HCH2g1250 | 246 | Pfam | Low molecular weight phosphotyrosine protein phosphatase | 80 | 233 | IPR023485 | - | |
HCH2g1250 | 246 | Gene3D | - | 61 | 241 | - | - | |
HCH2g1250 | 246 | SMART | LMWPc_2 | 78 | 235 | IPR023485 | - | |
HCH2g1250 | 246 | PANTHER | LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED | 58 | 242 | IPR052995 | - | |
HCH2g1250 | 246 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 123 | 139 | IPR017867 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
HCH2g1250 | 246 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 207 | 222 | IPR017867 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
HCH2g1250 | 246 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 80 | 97 | IPR017867 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
HCH2g1250 | 246 | CDD | LMWPTP | 79 | 234 | - | - | |
HCH2g1250 | 246 | SUPERFAMILY | Phosphotyrosine protein phosphatases I | 76 | 236 | IPR036196 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH2g1250 | K25307 | - | csv:101207515 | 352.443 |