Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g1250 ATGAGTGCGTTGCACTTGCAATTGCCGCTTAGAATCGACGCCAATCTCGCATTTTGCCCATTCTGCCTTCCTTCTCTGAAACCCTCGTTATTAGTTCTTTCTCTACCAATCAAATTCTCACATCTCCGGAAAAAGCTCAAAACTTCACCAAATTCCCACAAAACCCATTTCTCATCTTTTACAATTGCTTCCATGGCCAATCCCGCAAGCTCAGAGACAGAGGCAAAGCCGTTTTCAGTCCTTTTTGTGTGCTTAGGCAATATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGAGACTTGGTCAATAAAAAGGGTCTCAATTCCAATTTCAATATTGATTCTGCTGGCACCATTGGTTTCCATGAGGGTGATGAAGCTGATCCAAGAATGAGGGCTACCTCTAAACGGCGTGGGATAGAGATAACGTCGTTATCGAGGCCGATTCGGCCTTCTGATTTTAAAGATTTTGATCTCATTCTTGCCATGGATAAGAAAAACAGAGAGGATATTTTGGGGGCTTTCAATCGGTGGAAACACAGGGAGACTCTTCCTCCTGATTCACATAAAAAGGTCAAATTAATGTGCTCGTATTGCAAAAAACATGATGAAACAGAAGTTCCGGATCCTTACTACGGTGGGCAACAAGGGTTTGAGAAGGTTTTAGACTTGCTTGAAGATGCCTGTGAATCTCTACTGGAAAGCATCTTGGCAGAGAACAAACACATTTCAGGTTCATGA 741 43.18 MSALHLQLPLRIDANLAFCPFCLPSLKPSLLVLSLPIKFSHLRKKLKTSPNSHKTHFSSFTIASMANPASSETEAKPFSVLFVCLGNICRSPAAEGVFRDLVNKKGLNSNFNIDSAGTIGFHEGDEADPRMRATSKRRGIEITSLSRPIRPSDFKDFDLILAMDKKNREDILGAFNRWKHRETLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISGS 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 54819068 54820811 - evm.model.ptg000010l.254 HCH2g1250 540475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g1250 246 FunFam Low molecular weight protein-tyrosine-phosphatase 77 241 - -
HCH2g1250 246 Pfam Low molecular weight phosphotyrosine protein phosphatase 80 233 IPR023485 -
HCH2g1250 246 Gene3D - 61 241 - -
HCH2g1250 246 SMART LMWPc_2 78 235 IPR023485 -
HCH2g1250 246 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 58 242 IPR052995 -
HCH2g1250 246 PRINTS LMW phosphotyrosine protein phosphatase signature 123 139 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
HCH2g1250 246 PRINTS LMW phosphotyrosine protein phosphatase signature 207 222 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
HCH2g1250 246 PRINTS LMW phosphotyrosine protein phosphatase signature 80 97 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
HCH2g1250 246 CDD LMWPTP 79 234 - -
HCH2g1250 246 SUPERFAMILY Phosphotyrosine protein phosphatases I 76 236 IPR036196 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g1250 K25307 - csv:101207515 352.443