Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH2g1337 ATGACTTCTCCGGTAATCTCTATCGACGGCGACGAATTGACTCGTGCCGTTGAAAACCTCAACATTTCCGATCAGGTGAAAATGGAAAATAAGGTAGAGATTCAAGAAGCGGGGCATGGGAGTCATGGTGGGGCTTGTGCAATTTGCTTAAATAAGATTGTTCTTCAAGAAACTGCCCTGGTGAAGGGTTGCGAGCACGCTTATTGTGTGATGTGCATCCTTCAATGGGCCTCATACACTCAAAAACCAACTTGTCCACAATGTAAACATCCATTCGAGTTCCTGAGCGTGCATCGCTCTCTTGATGGGAGCATCCACGATTACATGTTTGAAGAGAGTGTATGCCTACTTTTGAGAGCCTCGTGGTTTAAACCTGTTGTGGAAGAGCGGGAAGAAACTTATGATGATCTGGAAGAGTACTACCATTATGAGGATGATGACGAAGAGCTTGAGGAAGCATACTTTGGTACATCACCTGGTCTCCGTATTGGCAATCGAAGGTGGGGTGACAATGGATATGTGAGAGCAGGCCGCCAAGAAGCACGACCAGTTCTTAGGCCAAATTTTCAAGAGTCTGTTGCTAGCTCATCACGTGAACCCAGAAGGAATGATGTTCCAAAAGATAAAACAGGCCGGCGAGCTAAAAGAGCCTTGAAACGAGAAGCCGCCGATAAGGCAGCTGCAGCTAAGCATCAAGAACGTTTGGCAAGGTTTGGGCGAACTTGA 726 46.69 MTSPVISIDGDELTRAVENLNISDQVKMENKVEIQEAGHGSHGGACAICLNKIVLQETALVKGCEHAYCVMCILQWASYTQKPTCPQCKHPFEFLSVHRSLDGSIHDYMFEESVCLLLRASWFKPVVEEREETYDDLEEYYHYEDDDEELEEAYFGTSPGLRIGNRRWGDNGYVRAGRQEARPVLRPNFQESVASSSREPRRNDVPKDKTGRRAKRALKREAADKAAAAKHQERLARFGRT 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55338210 55340359 - evm.model.ptg000010l.167 HCH2g1337 540562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH2g1337 241 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
HCH2g1337 241 MobiDBLite consensus disorder prediction 197 241 - -
HCH2g1337 241 SMART ring_2 46 88 IPR001841 -
HCH2g1337 241 Pfam Ring finger domain 45 89 IPR001841 -
HCH2g1337 241 SUPERFAMILY RING/U-box 45 95 - -
HCH2g1337 241 MobiDBLite consensus disorder prediction 179 241 - -
HCH2g1337 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 95 IPR013083 -
HCH2g1337 241 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
HCH2g1337 241 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 240 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH2g1337 - - - 0.0