Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH2g1337 | ATGACTTCTCCGGTAATCTCTATCGACGGCGACGAATTGACTCGTGCCGTTGAAAACCTCAACATTTCCGATCAGGTGAAAATGGAAAATAAGGTAGAGATTCAAGAAGCGGGGCATGGGAGTCATGGTGGGGCTTGTGCAATTTGCTTAAATAAGATTGTTCTTCAAGAAACTGCCCTGGTGAAGGGTTGCGAGCACGCTTATTGTGTGATGTGCATCCTTCAATGGGCCTCATACACTCAAAAACCAACTTGTCCACAATGTAAACATCCATTCGAGTTCCTGAGCGTGCATCGCTCTCTTGATGGGAGCATCCACGATTACATGTTTGAAGAGAGTGTATGCCTACTTTTGAGAGCCTCGTGGTTTAAACCTGTTGTGGAAGAGCGGGAAGAAACTTATGATGATCTGGAAGAGTACTACCATTATGAGGATGATGACGAAGAGCTTGAGGAAGCATACTTTGGTACATCACCTGGTCTCCGTATTGGCAATCGAAGGTGGGGTGACAATGGATATGTGAGAGCAGGCCGCCAAGAAGCACGACCAGTTCTTAGGCCAAATTTTCAAGAGTCTGTTGCTAGCTCATCACGTGAACCCAGAAGGAATGATGTTCCAAAAGATAAAACAGGCCGGCGAGCTAAAAGAGCCTTGAAACGAGAAGCCGCCGATAAGGCAGCTGCAGCTAAGCATCAAGAACGTTTGGCAAGGTTTGGGCGAACTTGA | 726 | 46.69 | MTSPVISIDGDELTRAVENLNISDQVKMENKVEIQEAGHGSHGGACAICLNKIVLQETALVKGCEHAYCVMCILQWASYTQKPTCPQCKHPFEFLSVHRSLDGSIHDYMFEESVCLLLRASWFKPVVEEREETYDDLEEYYHYEDDDEELEEAYFGTSPGLRIGNRRWGDNGYVRAGRQEARPVLRPNFQESVASSSREPRRNDVPKDKTGRRAKRALKREAADKAAAAKHQERLARFGRT | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 55338210 | 55340359 | - | evm.model.ptg000010l.167 | HCH2g1337 | 540562 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH2g1337 | 241 | ProSitePatterns | Zinc finger RING-type signature. | 64 | 73 | IPR017907 | - | |
HCH2g1337 | 241 | MobiDBLite | consensus disorder prediction | 197 | 241 | - | - | |
HCH2g1337 | 241 | SMART | ring_2 | 46 | 88 | IPR001841 | - | |
HCH2g1337 | 241 | Pfam | Ring finger domain | 45 | 89 | IPR001841 | - | |
HCH2g1337 | 241 | SUPERFAMILY | RING/U-box | 45 | 95 | - | - | |
HCH2g1337 | 241 | MobiDBLite | consensus disorder prediction | 179 | 241 | - | - | |
HCH2g1337 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 95 | IPR013083 | - | |
HCH2g1337 | 241 | ProSiteProfiles | Zinc finger RING-type profile. | 46 | 89 | IPR001841 | - | |
HCH2g1337 | 241 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 2 | 240 | - | - |
Pathway information
