Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH3g0342 | ATGGAAGAAACGTTTTTTCCCTTCCGTGGGATTAAGAATGATCTAAGAGGAAGGCTTATGTGCTATAAACAGGATTGGAGTGGTGGTTTTCACTCTGGTATCAGGATCTTGGCTCCAACAACTTACATATTCTTTGCTTCAGCAATTCCGGTTATATCTTTCGGGGAGCAGCTAGAAAGGAATACATATGGAACTCTGACTGCAGTACAAACTCTGGCATCAACAGCACTTTGTGGCATCATCCACTCTATTTTTGGAGGTCAGCCTTTACTCATCCTTGGGGTTGCTGAGCCAACTGTTTTGATGTATACATTTATGTTCAACTTTGCAAAAGATCGAAAGGAGCTCGGGCAAGAACTATTCTTAGCCTGGACCGGATGGGTATGTGTGTGGACTGCCATTTTGCTCTTCTTGCTGGCTGTGTTGGGTGCATGCTCCCTGATTAATAGGTTTACCCGTCTTGCTGGAGAATTGTTCGGTCTCCTAATTGCTATGCTCTTTATGCAGCAGGCAATACGTGGTGTTGTAGAAGAGTTTGGCGTACCGCAGAGAGAAAATTCTAATCAGGTTGCCCTCCAACTTCCTTGGCGCTTTGGCAACGGAATGTTTGCTTTGGTGCTGTCCTTTGGGCTTCTTCTTACTGCACTTAAAAGCCGAAAAGCTAGATCATGGCGTTATGGGACTGGCTGCCTACGAGGCTTTATCGCGGATTATGGAGTTCCACTTATGGTGCTCATATGGACTGCCGTATCCTACATTCCAGTGAATGATGTCCCAACTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCACGGCGCCTACTCAAATTGGACAGTTATAAAGGAAATGTTGAAAGTGCCTCCACTGTATATAGTTGGAGCATTCATACCAGCGACCATGATAGCGGTGCTATACTACTTCGATCACAGTGTTGCATCTCAACTTTCACAGCAGAAAGAGTTTAATTTGAAAAAACCAGCTTCTTATCATTATGATCTCCTTCTCCTGGGTTTCCTTGTTATACTGTGTGGACTAATAGGCATTCCACCCGCCAATGGCGTAATCCCACAGTCTCCAATGCACACGAAAAGCTTGGCTACCCTGAAACATCAGCTTTTGCGGAACAAGCTGGTAGTAGCAGCACGACAAAGTATCCGTAAAAATTCAAACTTGAGCCAATTATACCGGAACATGCAAGAGGCATATAACGAAATGCAGACACCTTTAGTATACCAAAATCCACCAGCTGTGGGGCTGAAGGAATTAAAAGAGTCCACCGTCCAACAAGCTTCAAGAACTGGCTACATTGATGCCCCCGTTGATGAAACTATTTTCGATGTGGATAAAGATATCGATGATCTTTTGCCTGTGGAAGTTAAAGAACAGCGTCTCAGCAATTTACTCCAGGCAACGATGGTCGGCTGTTGTGTTGCCGCTATGCCTGTTTTAAAGAAGATCCCAACTTCAGTTCTTTGGGGCTACTTCGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAATTCTGGGAAAGGATTTTGCTGCTGTTTACTGCTCCAAGCCGAAGATACAAGGTGCTGGAGAAATATCATCCCACCTTTCTGGAAACTGTTCCCTTCAAAACAATTGTCACCTTCACCTTGTTCCAGACAATTTACTTGCTGATGTGCTTTGGTTTAACCTGGATTCCAATTGCTGGCGTTCTCTTTCCACTGTTGATCATGCTTCTTGTCCCTGTGCGGCAGTATTTGCTCCCCAAGTTCTTCAAAGGCGCTCATCTTCAGGATCTGGATGCTGCAGAATACGAGGATGCCCCGGCAATAGCTTTCAACTCATCATTTGAAGATCGTAATGGAAGAACTCCCAACATTGACAATGGTGAAATACTTGATGAGATGATCACAAGAAGCCGTGGTGAGATTCGGCGTACACAGAGTCCGAAAGTGACAAGTTCGACCACCCCGACTTCATTAGCTGCCTACAGCCCACAGGTGTCAGAGAGGTTATACAGTCCTCGGATCACTGAACTGAGAAGGGAGAGAAGTTCTCTATCACCTGGAAAAGGACTTGAATTGAAGCAAAGTCCCAGTCCAGATCCAGGACCATCTACTATATAA | 2124 | 45.1 | MEETFFPFRGIKNDLRGRLMCYKQDWSGGFHSGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSIFGGQPLLILGVAEPTVLMYTFMFNFAKDRKELGQELFLAWTGWVCVWTAILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGVPQRENSNQVALQLPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLIWTAVSYIPVNDVPTGIPRRLFSPNPWSHGAYSNWTVIKEMLKVPPLYIVGAFIPATMIAVLYYFDHSVASQLSQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVAARQSIRKNSNLSQLYRNMQEAYNEMQTPLVYQNPPAVGLKELKESTVQQASRTGYIDAPVDETIFDVDKDIDDLLPVEVKEQRLSNLLQATMVGCCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEKYHPTFLETVPFKTIVTFTLFQTIYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEDAPAIAFNSSFEDRNGRTPNIDNGEILDEMITRSRGEIRRTQSPKVTSSTTPTSLAAYSPQVSERLYSPRITELRRERSSLSPGKGLELKQSPSPDPGPSTI | 707 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2188633 | 2192448 | + | evm.model.ptg000005l.1175 | HCH3g0342 | 541070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH3g0342 | 707 | FunFam | probable boron transporter 2 | 18 | 60 | - | - | |
HCH3g0342 | 707 | MobiDBLite | consensus disorder prediction | 638 | 707 | - | - | |
HCH3g0342 | 707 | Pfam | HCO3- transporter integral membrane domain | 7 | 181 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
HCH3g0342 | 707 | Pfam | HCO3- transporter integral membrane domain | 202 | 372 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
HCH3g0342 | 707 | Pfam | HCO3- transporter integral membrane domain | 460 | 602 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
HCH3g0342 | 707 | MobiDBLite | consensus disorder prediction | 646 | 666 | - | - | |
HCH3g0342 | 707 | MobiDBLite | consensus disorder prediction | 674 | 688 | - | - | |
HCH3g0342 | 707 | Gene3D | Helical hairpin bin | 18 | 60 | - | - | |
HCH3g0342 | 707 | PANTHER | ANION EXCHANGE PROTEIN | 6 | 638 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH3g0342 | HCH-Chr3:2188633 | HCH6g0432 | HCH-Chr6:11121183 | 2.0e-311 | dispersed | |
HCH3g0342 | HCH-Chr3:2188633 | HCH6g0199 | HCH-Chr6:2666437 | 5.00E-222 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH3g0342 | K24194 | - | csv:101203606 | 1284.24 |