Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH3g0927 ATGGCAGCTAACGATTCAGAGCAAATAGTCGACGTGCAATCAGTCGTAGAAGCGGTGGTCGCCGATGACAACTCCGACGCTCCTATTTACGAAGTTGAAAGCCTCTGTATGCGCTGCCGAGAAAACGGAATAACAAGATTTTTATTGACTTCGATTCCGCATTTCAGAAAGATCTTGTTGTCAGCCTTTGAATGTCCACATTGTGGTGAGAGGAATAATGAGGTTCAGTTTGCCGGTGAGATTCAGCCACGAGGCTGTTGCTACTCCTTGATGGTTCCTGTAGGCAACCAGAAGATGCTTGATCGACAAGTGGTGAAATCTGAATCTGCTATTATTAAGATCCCTGAATTGGACTTTGAGATTCCTGCAGAGGCTCAGCGTGGAAGTCTGTCAACAGTGGAAGGTATATTGGTTCGAGCTGTGGATGGATTGGAGGCCCTTCAAGAGGAACGTAGGAAAGTGGATCCTCAGACCGCTGAAGCAATAGACCAGTTTCTGCTAAAACTGAAAGCTTGTGCTGCAGGGGATTCGTCTTTCTCCTTCATTTTGGATGACCCAGCTGGCAATAGCTTCATTGAGAACCCATTTGCACCATCCAAGGATCCATCATTGAGTATTAAGTTTTATGAGCGGACTCCGGAACAACATGCATCATTGGGTTATTCTGTTGAGTCATCACAATTAGAAGTTGAGGGTAGAGCATCAACAAGTGGAGTTGAGGTTCCTAATCAAGTTAGAGGAGAGGCACATGGATCTATAGGAGCAGCAGCTGGCCATCGGGCAATAGCTCAGAGTAACACTGCAGAGATTGCTGACGCCTTATTTCGTTACACTGCACCCGAAGAAGTGATGACTTTCCCATCAACTTGTGGAGCTTGTGCCACCGGGAGTGAAACTCGAATGTTTGTAACCAAAATTCCCTACTTCCAAGAAGTGATTGTCATGGCATCTACTTGTGATGCTTGTGGTTATCGTAGTTCCGAGTTGAAGCCTGGTGGGCGAATCCCTGAAAAAGGAAAGATAATTACCCTTCATGTGAAGAATGTTAAAGATCTCAGCAGAGATGTGATAAAGTCAGATACTACAAGTGTGAGGGTTCCAGAGGTTGACTTGGAGCTTACTAGTGGCACTCTTGGTGGAGTTGTTACAACGGTTGAAGGTCTAATCACAAAAATAAGTGAAAGTCTGGAGAGAGTACATGGATTTACTTTTGGAGACAGTCTTGATGAAAATAAAAGAAATAAATGGCAGGACTTCAGAACAAGGCTTACCAAGCTTTTGAGTTTGGAAGAACCTTGGACTTTAATCCTTGATGATGCATTAGCAAACTCGTTTGTTGCGCCAGTGACTGATGATATGAAAGATGACCATCAGTTAAGGAATGAGGAGTATGAGCGGTCCTGGGAACAGAATGAGGAACTTGGTTTGAACGATATCGACACATCTTGTGCTGATGCTGCTTATAACTCAAATGATACAGGTGCATCCTGA 1491 44.33 MAANDSEQIVDVQSVVEAVVADDNSDAPIYEVESLCMRCRENGITRFLLTSIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLMVPVGNQKMLDRQVVKSESAIIKIPELDFEIPAEAQRGSLSTVEGILVRAVDGLEALQEERRKVDPQTAEAIDQFLLKLKACAAGDSSFSFILDDPAGNSFIENPFAPSKDPSLSIKFYERTPEQHASLGYSVESSQLEVEGRASTSGVEVPNQVRGEAHGSIGAAAGHRAIAQSNTAEIADALFRYTAPEEVMTFPSTCGACATGSETRMFVTKIPYFQEVIVMASTCDACGYRSSELKPGGRIPEKGKIITLHVKNVKDLSRDVIKSDTTSVRVPEVDLELTSGTLGGVVTTVEGLITKISESLERVHGFTFGDSLDENKRNKWQDFRTRLTKLLSLEEPWTLILDDALANSFVAPVTDDMKDDHQLRNEEYERSWEQNEELGLNDIDTSCADAAYNSNDTGAS 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8360631 8376039 + evm.model.ptg000005l.590 HCH3g0927 541655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH3g0927 496 PANTHER ZINC FINGER PROTEIN ZPR1 7 487 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
HCH3g0927 496 NCBIfam ZPR1 zinc finger domain 289 480 IPR004457 GO:0008270(InterPro)
HCH3g0927 496 NCBIfam ZPR1 zinc finger domain 36 222 IPR004457 GO:0008270(InterPro)
HCH3g0927 496 FunFam Zinc finger protein ZPR1 334 476 - -
HCH3g0927 496 FunFam zinc finger protein ZPR1 80 221 - -
HCH3g0927 496 Gene3D ZPR1, A/B domain 334 476 IPR042451 -
HCH3g0927 496 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
HCH3g0927 496 FunFam Zinc finger protein ZPR1 24 79 - -
HCH3g0927 496 Pfam ZPR1 jelly-roll domain 100 221 - -
HCH3g0927 496 Pfam ZPR1 jelly-roll domain 350 476 - -
HCH3g0927 496 Pfam ZPR1 zinc-finger domain 282 337 IPR004457 GO:0008270(InterPro)
HCH3g0927 496 Pfam ZPR1 zinc-finger domain 31 83 IPR004457 GO:0008270(InterPro)
HCH3g0927 496 Gene3D ZPR1, zinc finger domain 278 333 IPR042452 -
HCH3g0927 496 Gene3D ZPR1, zinc finger domain 24 79 IPR042452 -
HCH3g0927 496 FunFam Zinc finger protein ZPR1 279 333 - -
HCH3g0927 496 SMART zpr1 288 448 IPR004457 GO:0008270(InterPro)
HCH3g0927 496 SMART zpr1 34 194 IPR004457 GO:0008270(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH3g0927 K06874 - csv:101208000 825.854