Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH3g1210 ATGGCTTCCATTTCAATCTCCCTTTCTCTTTTGAGATTCACTTCAAAATGTTCTTTTTATAACCCATTCTTTATCACCCCCAAAACTAATAATAAAATCGAGAAATTGAATCCATTCAGAACCTTCTCGATGGCCTCAGAATCTCCTGCCAATAATCCTGGACTTCACTCTACCCCTGACGATGCCACCAAGAGTTACTTCATGCAGCAAACTATGTTTCGAATTAAGGATCCCAAAATCAGTCTTGATTTCTATTCTCGAGTTCTCGGCATGTCATTACTCAAGAGGCTGGATTTTCCTGAAATGAAGTTTAGTTTGTACTTTATGGGTTATGAGGATCTTGCTTCTGCTCCAAGCAGCTCGGTTGATAGAACAGTCTGGACATTTGGTCAAAAGGCTACAATTGAGCTAACACATAACTGGGGCACTGAAAGTGATCCTGAATTTAAAGGATACCATAATGGAAACTCAGAACCACGTGGCTTTGGACACATTGGTATAACTGTTGATGACACTTATAAGGCATGTGAGAGATTTGAACGCCTAGGTGTGGAATTTGTTAAGAAACCAGATGATGGCAAGATGAAGGGAATAGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTTGACCTCAACACTATTGGAAAAATCACTGCTTGA 669 39.61 MASISISLSLLRFTSKCSFYNPFFITPKTNNKIEKLNPFRTFSMASESPANNPGLHSTPDDATKSYFMQQTMFRIKDPKISLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDLASAPSSSVDRTVWTFGQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLNTIGKITA 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 44294452 44300742 - evm.model.ptg000005l.307 HCH3g1210 541938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH3g1210 222 NCBIfam lactoylglutathione lyase 68 215 IPR004361 GO:0004462(InterPro)|GO:0046872(InterPro)
HCH3g1210 222 Gene3D - 43 220 IPR029068 -
HCH3g1210 222 ProSitePatterns Glyoxalase I signature 1. 70 91 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
HCH3g1210 222 ProSitePatterns Glyoxalase I signature 2. 155 171 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
HCH3g1210 222 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 55 212 IPR029068 -
HCH3g1210 222 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 70 211 IPR004360 -
HCH3g1210 222 CDD GlxI_Zn 68 212 - -
HCH3g1210 222 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 67 214 IPR037523 -
HCH3g1210 222 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 41 219 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH3g1210 K01759 - mdm:103448063 353.214