Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH3g1263 ATGGCGGCCGCAGCTGCCGACCCTTCGTCGTTGCAATTTACGCCGACTTGGGCTTTGGCCGCTGTCTGCTTCATCTTCATCTCACTCTCTCTTTTTCTTGAACATTTGATTCATCTTCTTTCAAAATGGCTAAAACGAAATAGGAAGACCGCACTATTTGAGGCTGTTGAGAAGCTCAAGTCAGTGCTGATGCTTCTCGGGTTCATGTCGTTAACGCTGACGGTGACCCAACAGCCAGTTTCAAAGATTTGCATTTCGAACAAGGTAGCTTACACAATGCTTCCATGTCAGAAAGAAGTTCAGATCAATGCTCCTAAGAACTTGGAAACCGGAAAATACTATTGGAGCAGCTCTCCGGCGAATCAGAGTGGGTTGTTGTCATCGGAATTTGCAAGGATGGCGGAGGAGAAAGTGGGAGAGGAGAAAGCTCAGGGGAGTTATGAGTCTTCTTCTTCTTCTTCTGATTACTGTAGTAAAAAGGGGAAGACTTCATTGATATCAGAAGGAGGAATGAATCAACTCAATAACTTCATATTTGTATTGGCTGTTATGCAGATTGTTTACAGTGTCCTCACTCTGGCTTTGGGAAAGGCTAAGATGAGGCGTTGGAAAGCTTGGGAGCAAGAAACGCATACGTTGGATTACCAAGTGGCTAATGATCCAAATCGTTTTAGATATACAAGGCAAACGACATTCGCACGTCGACATATTAATTCATGTGCAACGACGTCGTTACTGCTCTGGATCAAATGCTTCTTTCGACAGTTCTTTCGATCTGTGGCCAAAATCGATTATCTCACCCTCCGCCATGGTTTCATCTCGACTCATTTACCTGCAAATACAACCTTTAACTTCCAAAAGTACATCGAAAGATCACTGCATGATGACTTCAAAGTCGTCGTTGGCATCAGTCCTTTCATGTGGCTAATAGTGGTTGTCTTCATTCTGGTAGATGTGCATGGTTGGAATGCATATCTTTGGGTCTCATTCCTCCCACTAATTATAGTATTGGCTCTTGGAACCAAACTTGAAGTGATAGTAGCAAGGCTTGCCCTTGGTCTTCAAGACAAGAACTCTGTGATCAAAGGAGCTCCTTTGGTGGAACCCCATGATGGCCTCTTTTGGTTCAATCATCCCAATTTTGTTTTAACCCTTCTACATTTCACTTTGTTTATGAATGCATTCGAAATTGCTTTCTTTATTTGGGTTACGCTGCAATATGGGATAAAATCTTGCTACCATGAAAAGATTGGGATTATCATTATAAGAGTAGTCTTAGCGATCACAGTCCAAGTCTTGTGCAGCTACATTACTCTACCTCTTTATGCTCTTGTAACTCAGATGGGATCACAGTTCAAAGCTGCTGCATTAGAAGAACACACAGCAAAAGCCCTCAAGCAATGGCACAAGGAAGTGAAGCAAAAGAGAAGAAACCACCACGACCACCAGCACCGTCATGACGATCACGATCACCGCCATCGGCATAAAGAACAGGAAGGCTCTTCACATTCACCGACCGAAGATCAGTCATCGACCATTATGGAAAGCAGCAGAACCCTGAGCTCACAAGAAATATATTCTTCTCATCATCGAACACCTACTTTTTCTGAACTTGTTAATAACTTTCCTGTGGGGGAGTCTGATGAGATTGTTGAAGAATGCACAGAAACGGTAGTGAGGGGTGAATCTGAGTTGGTGGAAATAAAAGTAGAAGAGATCATAAGGGAAACCAATAGAGGAGAAATTAGTGAAAGGTAG 1758 43.06 MAAAAADPSSLQFTPTWALAAVCFIFISLSLFLEHLIHLLSKWLKRNRKTALFEAVEKLKSVLMLLGFMSLTLTVTQQPVSKICISNKVAYTMLPCQKEVQINAPKNLETGKYYWSSSPANQSGLLSSEFARMAEEKVGEEKAQGSYESSSSSSDYCSKKGKTSLISEGGMNQLNNFIFVLAVMQIVYSVLTLALGKAKMRRWKAWEQETHTLDYQVANDPNRFRYTRQTTFARRHINSCATTSLLLWIKCFFRQFFRSVAKIDYLTLRHGFISTHLPANTTFNFQKYIERSLHDDFKVVVGISPFMWLIVVVFILVDVHGWNAYLWVSFLPLIIVLALGTKLEVIVARLALGLQDKNSVIKGAPLVEPHDGLFWFNHPNFVLTLLHFTLFMNAFEIAFFIWVTLQYGIKSCYHEKIGIIIIRVVLAITVQVLCSYITLPLYALVTQMGSQFKAAALEEHTAKALKQWHKEVKQKRRNHHDHQHRHDDHDHRHRHKEQEGSSHSPTEDQSSTIMESSRTLSSQEIYSSHHRTPTFSELVNNFPVGESDEIVEECTETVVRGESELVEIKVEEIIRETNRGEISER 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 47782049 47790184 + evm.model.ptg000005l.254 HCH3g1263 541991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH3g1263 585 MobiDBLite consensus disorder prediction 469 491 - -
HCH3g1263 585 MobiDBLite consensus disorder prediction 504 532 - -
HCH3g1263 585 MobiDBLite consensus disorder prediction 468 532 - -
HCH3g1263 585 Pfam Mlo family 10 498 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH3g1263 585 PANTHER MLO-LIKE PROTEIN 1 3 521 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH3g1263 HCH-Chr3:47782049 HCH4g0860 HCH-Chr4:5508344 2.10E-112 dispersed
HCH3g1261 HCH-Chr3:47585699 HCH3g1263 HCH-Chr3:47782049 1.80E-132 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH3g1263 K08472 - csv:101221560 795.038