Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0059 ATGTCAAAACCCTGGGGTGGAATCGGAGCCTGGGCCGCCGATGCTGAGCGCGCCGAAGCTGAAGAACGAGAGGAGCAAGCCGCCGCGGCTGCTGCGGCGGCGGCTTCACCAGCTGCATCGAAGAATTTCCCTAGCATTAAGGAAGGTTTGAATTCAAAACCCAAGAAGAAGAAAATGACGTTATCGGAGTTTACGATGGGGACTATCACGGGACCGGGGAATAGGAAAAATGAGTCTCAGGGATTGACTCCTGAAGAGATGCTTAGGCTTCCGACTGGTCCGAAAGATCGGTCTGGTGAGGAAATGCAGTATGGTCGGCTTGGTGGTGGTTTTTCATCCTATGATCGGTCCGGTCCGGCTCGAAATCGGGACCGTGATGAAGGGGATGGGTCTTGGGGTGGTGGAAGGAGATCTTATGGTGGTGGATTTGATGAGGAACGTAGAGGGCCTCCTTCTAGGGTTTCTAATTTTGATCAACCTTCTAGGGCTGATGAGGTTGATAATTGGGCAATGACGAAGAAATCTTCTACATTTGATTCACCTCGACAGAATCGGTACGCCTCCCTTGGTACCGGTGGTGGTGTTGGTATAGGAGGTGTGGCATCTAGGGCTGATGATGTTGATAATTGGGCTAGTGGGAAAAAGCCTATTGCATCGAGATCATCTACATTTGGTTCTGGTTTTCGTGATTCGGTAAATGAGCCTGATCGCTGGAGTAGAGGTCGTGTGCGTGAAAGTGATCAGGAACGACCCCGATTAGTATTGGATCCTCCGAAAGTCGGCGGTGTTGCGAATGAACCGGTCAGGACAAGCAAGTCGAATCCTTTTGGAGCAGCTAGGCCGAGAGAAGAGGTTTTGGCTGAGAAGGGATTGGATTGGAAGAAGCTGGAGTCGGAAATTGAAGCGAAAAAATCAAGTAGGCCGACGAGTGCTCATTCTAGCAGGCCGTCAAGTGCTCAATCGAGTCAGTCTGAGGGTCCTGGATTGCAGGGTATAGAGAACGTGTTGAAGCCGAGGGCAAAGGTTAATCCGTTTGGGGATGCCAAACCTAGGGAAGTTTTGCTGCAGGAACGAGGCAAGGATTGGCGAAAGATTGATATGCAACTGGAGCACCGTGCTCTTGACAGGCCTGAAACGGAACAGGAAAAAATATTGAAAAATGAAATTGATATTTTAAGAAAGGAACTGGAGGAAGGCTTGTCTCTAAAGACTAACAAAGAGGCTGTAGACTCTGCTGGAGACCTACTCAATCTGCGTGAAACAATAAGTAACAAAGAACGTGAACTGGAGATGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCTACTGAGAGGCCAGGCTCTGGAGCAGGTAGGGCTGTTGTCTTTCCTGAAAGACCGCCTTCTCAATCTGGATCCTTTGATGAGCCCAGAAGCTTTGAATCTGTGGATAGGCCTCGATCACGTGGCAATGTTGATGTATGGACTGCACCTGCTGATGATAGACGACCATTTCAAGGTGGCAGGGATAGAGGTTTTTTGGGCAACAGAGACATGGAGAGGTCAGGGTCAAGGGATAGATGGTGA 1578 49.37 MSKPWGGIGAWAADAERAEAEEREEQAAAAAAAAASPAASKNFPSIKEGLNSKPKKKKMTLSEFTMGTITGPGNRKNESQGLTPEEMLRLPTGPKDRSGEEMQYGRLGGGFSSYDRSGPARNRDRDEGDGSWGGGRRSYGGGFDEERRGPPSRVSNFDQPSRADEVDNWAMTKKSSTFDSPRQNRYASLGTGGGVGIGGVASRADDVDNWASGKKPIASRSSTFGSGFRDSVNEPDRWSRGRVRESDQERPRLVLDPPKVGGVANEPVRTSKSNPFGAARPREEVLAEKGLDWKKLESEIEAKKSSRPTSAHSSRPSSAQSSQSEGPGLQGIENVLKPRAKVNPFGDAKPREVLLQERGKDWRKIDMQLEHRALDRPETEQEKILKNEIDILRKELEEGLSLKTNKEAVDSAGDLLNLRETISNKERELEMLILDLDDKVRFGKKATERPGSGAGRAVVFPERPPSQSGSFDEPRSFESVDRPRSRGNVDVWTAPADDRRPFQGGRDRGFLGNRDMERSGSRDRW 525
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 343842 347218 - evm.model.ptg000015l.59 HCH4g0059 542303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0059 525 MobiDBLite consensus disorder prediction 445 525 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 500 525 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 309 329 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 63 81 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 118 132 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 1 352 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 215 229 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 282 308 - -
HCH4g0059 525 Coils Coil 415 435 - -
HCH4g0059 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 447 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
HCH4g0059 525 MobiDBLite consensus disorder prediction 233 254 - -
HCH4g0059 525 MobiDBLite consensus disorder prediction 170 187 - -
HCH4g0059 525 Pfam Plant specific eukaryotic initiation factor 4B 1 509 IPR010433 GO:0003743(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0525 HCH-Chr2:49004725 HCH4g0059 HCH-Chr4:343842 6.70E-27 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0059 K03258 - csv:101206526 718.768