Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0153 ATGGAAGCATCACGAGGGATGAAGAAGAGGGGCCATGGAAGTCGTTCTTGGATAAAGATTGATCAGGATGGGAACTCAGAGGTTTTGGAACTTGATAAGGCTACAATAATGAGGCATTGTTCCTTACCTTCAAGAGATATGCGACTTTTAGATCCTCTTTTCATTTGTCCATCCACAATACTGGGAAGAGAGAAGGCAATTGTTGTCAGTCTCGAGCAGATTCGGTGTGTAATCACATCTGATGAGGTTATTCTAATGAACTCTTTAGACGGATGTGCTGTCCAATACAAGTCAGAACTATGTAAGCGTTTACAGACTAATAAAGAGCAATCAGATGATTTGCCCTTTGAATTTAGGGCTCTGGAGCTGGCTTTGGAACTTACTTGCTTGTTTCTTGACACTCAGGTGAAGGAGATGGAAATTGAGATATACCCTCTTTTGGATGATTTAGCATCTTCAATCAACACACTTAATCTTGAAAGAGTAAGGAGATTTAAGGGCAACCTCCTGGCCTTGACTCAACAAGTGCAAAAGGTGCATGATGAAATTGAACATCTGATGGATGATGATGGGGATATGGCTGAGATGTATTTAACAGAGAAGAAACAAAGATTAGAGGCAAATATCCAAAGAAACGTGTATGTCGAAACTAATTTCTGGGGAAAACTGCAACCAAAATCTGCTCCTGTTTCACCGGTGGGTTCCATCAGTGGAGCTCAGAAATTACAAAGGGCTTTTAGCAGTATTGTGAATTCAAGCAGACAAGGAAGCTTCATGAGTTCATCAAATAATGGAGAAAACATTGAACAATTGGAAATGCTGCTTGAAGCATACTTTGTGGTTATTGATGACACACTCAGTAAATTGTTATCACTCAAAGAATCCATAGACGATACTGAAGATTTAATCAACATTAAACTGGGCAACGTTCAGAACCAGTTGATTCAATTTCAATTGCTTCTTACCGCGGCTACTTTCTTGGCTGCCGTATTTGCGGCATTAACAGCAGTCTTTGGCATGAACTTTGCTGATGACGTCTTTAAACATCCTAATACTTTCAATTGGGTGATTTACTCAACCACAATTGCTTGTGGGTTCTTGTATTTCTCTTTTCTGATCTATTTTAGGCACAAGAAAATTTTCCCTCTGTAA 1152 39.5 MEASRGMKKRGHGSRSWIKIDQDGNSEVLELDKATIMRHCSLPSRDMRLLDPLFICPSTILGREKAIVVSLEQIRCVITSDEVILMNSLDGCAVQYKSELCKRLQTNKEQSDDLPFEFRALELALELTCLFLDTQVKEMEIEIYPLLDDLASSINTLNLERVRRFKGNLLALTQQVQKVHDEIEHLMDDDGDMAEMYLTEKKQRLEANIQRNVYVETNFWGKLQPKSAPVSPVGSISGAQKLQRAFSSIVNSSRQGSFMSSSNNGENIEQLEMLLEAYFVVIDDTLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLLTAATFLAAVFAALTAVFGMNFADDVFKHPNTFNWVIYSTTIACGFLYFSFLIYFRHKKIFPL 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 850633 853724 - evm.model.ptg000015l.153 HCH4g0153 542397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0153 383 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 380 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
HCH4g0153 383 CDD Mrs2_Mfm1p-like 17 380 IPR039204 -
HCH4g0153 383 Gene3D Magnesium transport protein CorA, transmembrane region 92 314 - -
HCH4g0153 383 Gene3D - 3 88 - -
HCH4g0153 383 Pfam Magnesium transporter MRS2-like 20 205 - -
HCH4g0153 383 Coils Coil 169 189 - -
HCH4g0153 383 FunFam Magnesium transporter MRS2-1 5 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0153 HCH-Chr4:850633 HCH6g0297 HCH-Chr6:4354754 1.10E-111 dispersed
HCH4g0153 HCH-Chr4:850633 HCH5g0064 HCH-Chr5:389426 6.10E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0153 K16075 - csv:101220835 598.201