Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0157 ATGATGACATCGGAGCATTTCCTCCTCTTCATACCCACCACCATTCTCAGCTTCCAAGCACTCTTCCTCTCTCTTCTCCTCATCACCATTTTCTTTCTCTTTCTTCATCCCGGCGGCCTGGCTTGGGCTCTTTCCAAAACAAAAACCACCACCACTGCCGCCGCCGCCGCTGCCATTCCCGGGCCTTCAGGTTTTCCACTTATTGGTTTGCTTCATATCTTCTCTCTTTCTACTCCCCATAAAGCTCTCTCCAACCTTGCCAATATCTTCAACGCTAAGTCTCTCATGGCTTTCTCCGTTGGCTTCACGCGCTTCATCATCTCTAGCGAACCCGATACCGCGAAAGAGATACTGAGTAGTGCTGCTTTCGCAGATAGACCGGTGAAGGAATCAGCTTATGAGCTTTTGTTTCATAGAGCAATGGGGTTTGCTCCTTATGGTGAATATTGGAGGAACTTAAGGAGAATATCAGCTACTTACATGTTTTGCCCTAGAAAGATATCTTCTTTTGAAAGCTTTAGGCTTGATATGGGGTTTAAAATGGTGGAAGAGATTAAGGACTATATGATCGAGAGAGGTGAAGTGGAAGTTAAGAAGATTCTTCATTTTGGTTCTCTTAATAATGTAATGATGACTGTTTTTGGAAAATGTTATGATTTTCACGAAAGAGATGGGATTGAGCTTGAGAAGTTGGTTAGTGAAGGTTATGAGTTGCTTGGAGTTTTTAATTGGAGTGATCATTTCCCTTTATTGGGTTGGTTGGATTTACAAGGAGTGAGGAAAAGGTGTAGAGCTTTAGCTTCAAAGGTGAGATTTTTTGTGGGAAAAATCATCGAGGATCATAGAATGAAAAGAACAAATGGAAAACTAGATAAAAGTAACGATTTTGTTGACGTTTTGCTTGATTTGGAGAAAGATGATAAGCTTGTTGATTCTGATATGATAGCTGTTCTATGGGAAATGATTTTTAGAGGAACTGATACAGTTGCAATTCTTCTAGAGTGGATATTAGCAAGAATGGTGTTGCACCCAGAAATTCAAAGCAAAGTCCAATATGAAATTGATTCTGTCATTGGAAAGTTTAGAACTGTTTTAGATTCTGATATTCCAAAGCTCCCATATTTGCAATCAGTGGTGAAAGAATGTCTAAGAATGCATCCTCCTGGCCCACTTCTATCATGGGCTCGCCTGGCTATTCATGATGTTCAAATTGGTCAAAGTTTGATTCCAGCAGGAACGACAGCGATGGTGAATATGTGGGCAATAACTCATGATGACAAAGTTTGGTCCGAGCCTGAAAAGTTTAAACCAGAAAGGTTTATGGAAGAGGAAGTAAGTGTTTTTGGTTCTGATTTGAGGTTGGCTCCATTTGGATCAGGAAGGAGAGTTTGTCCTGGCAAGGCATTGGGTTTAGCCACTGTTCATCTTTGGTTGGCTCAGTTGCTTCAAACTTTCAAATGGGTTCCTTCTGAAAGTAGCAAAAATGGTGTTGATTTGTCTGAATGTCTGAAACTGTCCATGGAGATGAAAACTCCATTGATATGCAGAGCTATTCCAAGGATTGGCTGA 1569 41.05 MMTSEHFLLFIPTTILSFQALFLSLLLITIFFLFLHPGGLAWALSKTKTTTTAAAAAAIPGPSGFPLIGLLHIFSLSTPHKALSNLANIFNAKSLMAFSVGFTRFIISSEPDTAKEILSSAAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFCPRKISSFESFRLDMGFKMVEEIKDYMIERGEVEVKKILHFGSLNNVMMTVFGKCYDFHERDGIELEKLVSEGYELLGVFNWSDHFPLLGWLDLQGVRKRCRALASKVRFFVGKIIEDHRMKRTNGKLDKSNDFVDVLLDLEKDDKLVDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKVQYEIDSVIGKFRTVLDSDIPKLPYLQSVVKECLRMHPPGPLLSWARLAIHDVQIGQSLIPAGTTAMVNMWAITHDDKVWSEPEKFKPERFMEEEVSVFGSDLRLAPFGSGRRVCPGKALGLATVHLWLAQLLQTFKWVPSESSKNGVDLSECLKLSMEMKTPLICRAIPRIG 522
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 876781 878452 - evm.model.ptg000015l.157 HCH4g0157 542401
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0157 522 CDD CYP78 91 513 - -
HCH4g0157 522 Pfam Cytochrome P450 60 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 SUPERFAMILY Cytochrome P450 59 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 FunFam Cytochrome P450 78A5 51 520 - -
HCH4g0157 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH4g0157 522 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 Gene3D Cytochrome P450 44 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0157 522 PANTHER CYTOCHROME P450 78A7-RELATED 15 517 IPR051996 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g1142 HCH-Chr1:58889835 HCH4g0157 HCH-Chr4:876781 1.20E-151 dispersed
HCH4g0157 HCH-Chr4:876781 HCH14g0531 HCH-Chr14:34236760 9.20E-72 dispersed
HCH13g1031 HCH-Chr13:30164780 HCH4g0157 HCH-Chr4:876781 4.20E-144 transposed
HCH2g0137 HCH-Chr2:9640380 HCH4g0157 HCH-Chr4:876781 3.00E-134 transposed
HCH3g0127 HCH-Chr3:811990 HCH4g0157 HCH-Chr4:876781 1.70E-201 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0157 K20619 - csv:101221468 757.288