Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0369 ATGGCGAAATCGGTGTCGGTTGATGGGAATAAGAAGAAAAACATTGAAAATTTGGTATCTGCTACTGTGTCATTGAAGGTTAGCTTAGAGAAATCGAAGGTTTTAGGGTTAGCTTTAGAAAAGGCTGGGCCTAGATTGGAAGAAATTAGCCAGAGATTGCCGATCCTCGAAGCTGCGGTTCGTCCTATTCGTGCCGACAAGGAGGCGCTTAGCGCCGTTGGTGGTCATATTAACCGTGCCGTTGGTCCGGCTGCGGCCGTGCTTAAGGTGTTTGATGCTGTTCATGGGCTTGAGAAGTCTCTGTTATCGGACCCGAGGAACGATCTCCCAGGTTATTTGTCAGTGTTGAAACGTATGGAAGAAGCACTGAGATTTTTGGGAGATAATTGTGGATTGGCAATTCAGTGGTTGGAGGATATAGTTGAGTATTTAGAGGATAATGCTGTTGCCGATGAAAGGTATCTTGCAAGTTTGAAGAAATCACTGAAAAATTTAAGAGATTTGCAAAATAATGAGGAAAGGACTCATCTTGATGGAGGGCTTTTGAATGCTGCATTAGATAAGTTAGAGAATGAGTTTAGGAGGCTTTTAATGGAGCATAGTGTGCCTCTTCCAATGTCGTCTTCTGCGTCTCTTGGTGAACAAGCGTGCATTGCCCCATCTCCGTTACCTGTAACTGTTATTCAGAAATTGCAAGCGATTCTCGGGAGGTTGATTGCTAATAAAAGACTTGAGAGATGCATAACTATTTATGTTGAAGTTCGTAGTTCAAATGTTAGGGCGAGTTTACAGGCTCTTGATTTGGATTATTTGGAGATATCGGTTTCGGAGTTCAATGACGTGCAAAGCATCGAGGAGTACATATCGAAATGGGGGAAGCATTTGGAGTTTGCTGTAAAACACTTGTTTGAGGCTGAGTTCAAGCTTTGTAATGATGTTTTTGAGAGGATAGGATTGGATGTGTGGATGGGTTGTTTTGCCAAGATAACAACCCAAGCAGGTATTCTTGCGTTTCTTCAATTTGGGAAAACTGTTACGGAAAGCAAGAATGACCCTATTAAGCTATTGAAGTTGTTGGACATATTTGCATCTTTGAACAAACTGAGACTCGACTTCAATCGGCTCTTTGGAGGAGCTGCGTGTTTGGAAATTCAAAATCTTACTAGGGATCTTATTAAGAGGGTTATTGATGGTGCATCTGAGATTTTCTGGGAACTTCTAAGTCAGGTGGAGTTGCAGAGGCAGAATCCACCCCCTTTAGATGGGGCTGTTCCAAGGTTGGTTAGCTTCATTATTGATTACTGTAATAAACTGCTCGGTGATGATTATCGGCCTATTCTCACCCAGGCCTTGGTCATTCACCGTAGTTGGAAGAAAGAAAAGTTCCAAGAGGGTCTTCTTGTCAATGAGGTTTTGAACCTTGTTAAAGCTGTAGAGTTAAATTTGGAGACTTGGATAAAGGTTTATGAAGATTCTAGCTTGTCTAATTTTTTTGCTATGAACAATCATTGGCATCTATATAAGCATCTCAAGGGAACGAAACTTGGGGAACTTTTGGGAGATCCTTGGTTAAGGGAACATGAACAATACAAGGATTACTATGCTGCAGTATTCTTGAGAGATAGCTGGAGTAAGCTTCCTGGCCATTTAAGCAGGGAAGGTTTAATTATGTTCTCAGGTGGGCGAGCTACTGCCCGTGATCTTGTCAAGAAACGTTTAAAGACATTTAATGAAGCTTTTGAGGATATGTATAAGAAGCAGTCCATCTGGGTTGTGACTGATAAAGAATTGAGGGAGAAGACATGCCAACTTATAGTGCAAGCAGTTGTGCCCGTATATCGCAGCTACATGCAGAATTATGGCCCCTTGGTTGAGCAAGATGCAAGTTCCAGTAAGTATGCAAAATACACTGTGCAGAATTTGGAGAAAATGTTACTATCCCTTTTTCAGCCAAAGCCGATTAGGTACGGCAGCTTAAAGGCTAGGCAGCCTAGTGGGAAATTCAGCAATGGAGCAGCAGATTATCGTCGTTCCAACACCACAGTTATGTAA 2052 42.11 MAKSVSVDGNKKKNIENLVSATVSLKVSLEKSKVLGLALEKAGPRLEEISQRLPILEAAVRPIRADKEALSAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNAVADERYLASLKKSLKNLRDLQNNEERTHLDGGLLNAALDKLENEFRRLLMEHSVPLPMSSSASLGEQACIAPSPLPVTVIQKLQAILGRLIANKRLERCITIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEEYISKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKITTQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGASEIFWELLSQVELQRQNPPPLDGAVPRLVSFIIDYCNKLLGDDYRPILTQALVIHRSWKKEKFQEGLLVNEVLNLVKAVELNLETWIKVYEDSSLSNFFAMNNHWHLYKHLKGTKLGELLGDPWLREHEQYKDYYAAVFLRDSWSKLPGHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSIWVVTDKELREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLFQPKPIRYGSLKARQPSGKFSNGAADYRRSNTTVM 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2431886 2433937 + evm.model.ptg000015l.369 HCH4g0369 542613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0369 683 Pfam Exo70 exocyst complex subunit C-terminal 289 646 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
HCH4g0369 683 Coils Coil 155 175 - -
HCH4g0369 683 Gene3D Exocyst complex component Exo70 135 655 - -
HCH4g0369 683 FunFam Exocyst subunit Exo70 family protein 137 655 - -
HCH4g0369 683 SUPERFAMILY Cullin repeat-like 87 649 IPR016159 -
HCH4g0369 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 103 651 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
HCH4g0369 683 Pfam Exocyst complex component Exo70 N-terminal 82 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0369 HCH-Chr4:2431886 HCH4g1569 HCH-Chr4:12246572 1.60E-188 dispersed
HCH4g0369 HCH-Chr4:2431886 HCH9g0296 HCH-Chr9:1835650 5.10E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0369 K07195 - csv:101207478 1196.03