Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0535 ATGATATTCTCCGAGGATATTTGGCAGATTCTCTGCCTTAAAGACTTCCAAGAAAAAACTGATTACCTTTTCCAGACAATGTCAAAATCCATGGCGAATTCAGCGTGTGGAAATTCCGATTCAATCCTCTGTCGAAACGACGCCGCGGCACTCAATCTTAAACTGATCGCCATCGCTTCAATTCTCGCGTCTGGTGTGATCGGAATCCTCATTCCATTGTTTGGTAAACGCCGTCGTTTTTTAAAAACAGACGGAAACCTTTTCGTAGCCGCTAAAGCCTTCGCCGCCGGCGTAATTCTGGCCACCGCTTTCGTCCACATGCTTCCTGATGGATCCAATGCTTTGTCCGATCCTTGCTTGCCGGAATTCCCCTGGTCGAAATTCCCGTTTTCTGGATTCTTCGCTATGATGGCTGCGCTCATCACGCTTCTTGTTGATTTCGTCGGGACTCAGTATTACGAAAGGAAACAGAGGTCGGTTCGGGTCGAAGGGGAACCGGGTCGGGTCAGTTTGTTAGAACCCGGGAGTGATATGAATGGGAATGGGATGCATATTGTTGGAATTCATGCACACGCGGCGCAACATAGACATAGCCATCCGCAAGGGAAGGACGCGTGTGATGGGCACGTGCGTGATCACGTGCACGGGCATGGGCATTCTCATGGGTTTGATGATGACGATAATGATGATGAAAGTGGGGCACGACATGTCGTTGTTTCGCAGATTTTGGAGCTTGGAATCGTGTCACATTCTGTGATCATTGGATTGTCGCTGGGAGTATCACACAGTCCGTGCACAATAAGACCCTTAATTGCGGCCTTGTCATTCCATCAGTTCTTTGAAGGATTTGCACTTGGAGGCTGCATCTCTCAAGCTCAATTCAACAACTTCTCCACCTCCCTCATGGCCGTCTTTTTCGCCATAACGACGCCCGCGGGAATTGGCATCGGGGCAGCCGTGTCCTCCATCTATAACCCGAACAGCTCAGGAGCATTGGTTGCTGAAGGCATAATGGATTCTCTGTCTGCTGGGATTTTAGTGTATATGGCTCTGGTGGATCTGATTGCGGCTGATTTTTTGAGCAAGAGAATGAGATGCAATTTTAGACTGCAAGTTGTTTCATATTGCGCACTCTTTCTTGGCGCTGGATTGATGTCTTCCCTTGCAATATGGGCTTGA 1179 48.6 MIFSEDIWQILCLKDFQEKTDYLFQTMSKSMANSACGNSDSILCRNDAAALNLKLIAIASILASGVIGILIPLFGKRRRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSNALSDPCLPEFPWSKFPFSGFFAMMAALITLLVDFVGTQYYERKQRSVRVEGEPGRVSLLEPGSDMNGNGMHIVGIHAHAAQHRHSHPQGKDACDGHVRDHVHGHGHSHGFDDDDNDDESGARHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNNFSTSLMAVFFAITTPAGIGIGAAVSSIYNPNSSGALVAEGIMDSLSAGILVYMALVDLIAADFLSKRMRCNFRLQVVSYCALFLGAGLMSSLAIWA 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3474904 3476609 + evm.model.ptg000015l.535 HCH4g0535 542779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0535 392 PANTHER ZINC/IRON TRANSPORTER 48 391 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
HCH4g0535 392 Pfam ZIP Zinc transporter 52 389 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
HCH4g0535 392 NCBIfam ZIP zinc/iron transport family 36 392 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0535 HCH-Chr4:3474904 HCH7g0020 HCH-Chr7:169414 4.50E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0535 K14709 - csv:101218224 570.081