Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0597 ATGAAGATGCAAACTTTCAGACTCTTACAGTTGTTTCTGTTTATATTTCTGATTGTATGCTACTCATATGTAGGAGCACAAAAGAAGAATCAACCGTCCAAGAAGACTTACATAATTCACATGGACAGGAGCAACATGCCACAAGCCTTTAATGACCACTTCCAATGGTATGATTCTTCTTTGAAATCGGTTTCGGATTCGGCCGAAATACTTTATTCCTACCAAACAGTAATTCATGGCTTCTCCACGAGACTAACTGTGGAGGAAGCAGAGTTTATGGAAAAGAGAGAAGGAATTGTTGCTGTCATTCCTGAAATGAAATATGAGCTTCATACAACTCGGACGCCTGAGTTTCTTGGACTTGGAAAGAGTGATGCTTTCTTTCCAGAGTCTGAGAAAGTGGGTGAAGTTATCATTGGAGTATTGGATACTGGTGCATGGCCTGAATTAGAGAGCTATAACGATGAGGGGCTTGGACCAATACCCACAAGCTGGAAAGGAGAATGTGAAGTAGGTAAGAACTTCAATTCATCTAGTTGCAACAGGAAACTGATTGGAGCTAGATTTTTTGCAAAGGGTTATGAAGCAGCATTTGGCCCTATTGATGATTCCCAGGAATCAAAGTCACCAAGGGATGATGATGGCCACGGAACTCACACCTCAACTACTGCTGCTGGATCCGTTGTCGCCGGAGCTAACCTTTTCGGTTTCGCTGCCGGGACAGCCAGAGGAATGGCGCCTCAAGGTCGGCTTGCAACGTATAAGGTATGTTGGCTTGGAGGGTGTTTTGGCTCCGACATTTTAGCTGCAATCGACAAGGCTGTTGAAGATGGTGTCAATGTTCTGTCCATGTCTCTTGGGGGATCGTCTCCTGATTACTACAGAGACAATGTTGCCATAGGATCTTTCTCAGCTATGGCACATGGAGTCTTTGTGTCATGTTCTGCTGGGAATGGTGGGCCATCACAAGGTAGCTTGTCCAACGCTGCACCATGGATAACCACGGTCGGGGCCGGAACTTTAGACAGAGATTTCCCTGCTTATATTACTCTTGGAAATGAAAAAAAATTCACTGGGGTATCTCTCTGCAGTGAAAAATCCTTGCCTGATTCTTTAGTACCCCTTATTTATGCTGCCAATGCTAGTAACTCAACCAGTGGCAGCCTTTGCATGACTGGTACTCTGATTCCAGAAAAGGTGGCTGGGAAAATAGTCTTATGTGACCGTGGAGCAAACGCTAGAGTCCAAAAAGGGGTGGTGGTGAAAGAGGCTGGCGGCTTGGGGATGATTCTAGCTAACACTGAAACTTATGGGGAGGAACAGTTGGCCGATGCACATCTCTTGCCAACGGCAGCAGTTGGGCAGAAAATTGGTGAGGCAATAAAGAGTTACATCTCCTCCACCGCAAATCCTAAGGCGAAAATCACCACCGGGATGACAAAGTTAGGCGTTGAACCATCGCCGGTAGTGGCTGCATTCAGTTCTAGAGGCCCAAATATGCTCACTCCACAAATACTCAAACCAGACCTCATAGCACCGGGAGTGAATATTCTTGCTGGATGGACTAGAGGAGCTGGGCCAACTGGTTTAGAAAGTGACAAGAGGCGTGTAAACTTCAATATCATTTCAGGCACATCAATGTCATGCCCACACATAAGTGGGCTTGCAGCTCTTTTGAAAGCTGCCCATCCTGATTGGAGTCCGGCAGCCATTAGATCAGCCCTGATGACCACTGCCTACTCAACATACAAAAATGGAGAGACAATAAGAGACTTATCCAGTGGACAACCATCAACGCCATTCGACTTCGGGGCCGGACATGTCAATCCGATGGCCGCCCTTGATCCCGGCCTTGTATATGATGCCACCGTCGACGACTACTTCGGCTTCCTCTGCGCCTTGAACTACAGCTCTCTTCAAATTAAGCTCATCTCTAAAAAAGACTTCACCTGCAGCGAAAGCAAGAAGTACAGAGTGGAAGATCTGAATTACCCTTCTTTTGCAGTTCCCTTAGAAACACCTTCAGGCATAGGAGGCGGTGGAAATGCTGCACCGACCACCATTGAATATACAAGGACTCTGACCAATGTAGGTGCCTCATCAACTTATAAGGTCTCAGTGACTTCCAAAAGTCCATCAGTGAAGATTGTGGTTGAGCCAGAATCACTAAGTTTTGCAAAAGTAAATGAGCAGAAAACTTATAAAGTGACATTTACTGCTGCTCCAATGCCTTCTGGGACAACAAGCTTTGCCCATCTAGAATGGTCAGATGGGAAACACATTGTAGGTAGCCCCATTGCTTTTAGCTGGACTTGA 2316 45.98 MKMQTFRLLQLFLFIFLIVCYSYVGAQKKNQPSKKTYIIHMDRSNMPQAFNDHFQWYDSSLKSVSDSAEILYSYQTVIHGFSTRLTVEEAEFMEKREGIVAVIPEMKYELHTTRTPEFLGLGKSDAFFPESEKVGEVIIGVLDTGAWPELESYNDEGLGPIPTSWKGECEVGKNFNSSSCNRKLIGARFFAKGYEAAFGPIDDSQESKSPRDDDGHGTHTSTTAAGSVVAGANLFGFAAGTARGMAPQGRLATYKVCWLGGCFGSDILAAIDKAVEDGVNVLSMSLGGSSPDYYRDNVAIGSFSAMAHGVFVSCSAGNGGPSQGSLSNAAPWITTVGAGTLDRDFPAYITLGNEKKFTGVSLCSEKSLPDSLVPLIYAANASNSTSGSLCMTGTLIPEKVAGKIVLCDRGANARVQKGVVVKEAGGLGMILANTETYGEEQLADAHLLPTAAVGQKIGEAIKSYISSTANPKAKITTGMTKLGVEPSPVVAAFSSRGPNMLTPQILKPDLIAPGVNILAGWTRGAGPTGLESDKRRVNFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGETIRDLSSGQPSTPFDFGAGHVNPMAALDPGLVYDATVDDYFGFLCALNYSSLQIKLISKKDFTCSESKKYRVEDLNYPSFAVPLETPSGIGGGGNAAPTTIEYTRTLTNVGASSTYKVSVTSKSPSVKIVVEPESLSFAKVNEQKTYKVTFTAAPMPSGTTSFAHLEWSDGKHIVGSPIAFSWT 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3955902 3958217 + evm.model.ptg000015l.597 HCH4g0597 542841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0597 771 CDD Peptidases_S8_3 108 580 IPR034197 -
HCH4g0597 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 111 IPR037045 -
HCH4g0597 771 FunFam Subtilisin-like protease SBT1.5 136 352 - -
HCH4g0597 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 766 IPR045051 -
HCH4g0597 771 Gene3D - 342 482 - -
HCH4g0597 771 MobiDBLite consensus disorder prediction 201 223 - -
HCH4g0597 771 FunFam subtilisin-like protease SBT1.5 342 482 - -
HCH4g0597 771 Gene3D - 631 770 - -
HCH4g0597 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
HCH4g0597 771 Pfam Subtilase family 136 606 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH4g0597 771 ProSiteProfiles Serine proteases, subtilase domain profile. 107 614 - -
HCH4g0597 771 CDD PA_subtilisin_like 348 475 - -
HCH4g0597 771 FunFam Subtilisin-like protease SBT1.9 26 111 - -
HCH4g0597 771 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH4g0597 771 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH4g0597 771 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
HCH4g0597 771 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
HCH4g0597 771 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
HCH4g0597 771 Pfam Peptidase inhibitor I9 36 111 IPR010259 -
HCH4g0597 771 Pfam PA domain 388 461 IPR003137 -
HCH4g0597 771 Pfam Fibronectin type-III domain 661 767 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0597 HCH-Chr4:3955902 HCH8g0597 HCH-Chr8:42753632 3.20E-230 dispersed
HCH14g0343 HCH-Chr14:32310785 HCH4g0597 HCH-Chr4:3955902 3.20E-299 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0597 - - - 0.0