Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0686 ATGTCTACTACTTCCATATCTTTACCGTATCTCCAATTCAGATGTCCCCAAAAACAATCAAAAACCAAAACTCCCAAAATCTCAATCCGCCGACCGATCTGCTTAGCCGATGGACCTTCCGTACAAACCCAACAACGAACGACTCCGCATCTTGAAAAGACGAAACTCCCTTTAAGGAAAATCCCGGGAGACTGCGGTCCACCCTTTTTCGGTCCAATGAAAGACCGGTTCGATTATTTCTACAACCAAGGCCGTGAAGAGTATCTCAAATCCCGCATGCATCGTTACGAATCGACCGTTTTCAGAGCCAACATGCCACCGGGTCCTTTCATTGCCTCCGATCCACGTGTCGTCGTTTTACTCGACGGTAAGAGTTTCCCAGTTCTTTTTGACAGTTCCAAGGTTGATAAGACAAATATCTTCACCGGTACTTTCATGCCTTCCACTGCTCTCACCGGCGGTTACCGTGTTCTCTCTTACCTCGACCCCGCCGAACCGAATCACGACAACCTTAAAACCCTCATTTTCCATCTCTTGAAAACCAGCCGTGATCGGATATTACCGGAGTTTCATTCTAGCTATAGTGAGCTTTTTCAAACATTAGAGAAAGAGCTTTCTTTCCATGGAAAAGCTGAATTTGGACCACCCAGTGAGCAAGCTGCTTTTAATTTCTTGGCGCGTTCTCTCCTTGACACAAACCCTGCTGATACAAAACTAGGTCTTGACGGTCCAAAAATCATCTCCAAATGGGTTCTTTTCCAACTCGGTCCGGTTCTTACCCTCGGTCTTCCTAAGGTCGTCGAAGAGATTCTCTTACGAACCGTTCGTCCACCGCCGTCTCTCATCAAATCCGATTATGAAAAACTCTACCAATTCTTTCACAAATCCGCTCCGGAATCTTTCTTTTCCGAAGCTGAAAGATTGGGAGTTTCCAAGGAAGAAGCCTGTCATAATTTACTTTTCACTACATGTTTTAACTCATTTGGAGGGATGAAGATTTTGTTTTCAAACATGATTAAATGGATCGGACGTGGTGGATTAAACCTCCACACGGATCTCGCTCGTGAGATAAGATCTGTCGTGAAATCCAACGGTGGGAGAATCACGATGGCCGGATTGGAAAACATGCCGTTGACAAAATCAGTCGTTTATGAAACACTGAGGATTGAACCGCCGGTTGCTTTACAATATGGAAGAGCGAAGAGGGATATGATAATAGAGAGCCACGATGCAGCTTTTGAGGTAAAAGAAGGAGAGGTGATATTTGGGTATCAGCCATTTGCGACAAGAGATCCTAAGATATTTGAGAGATCCGAGGAATTTGTCGGGGATAGGTTTATTGGGGAGGAAGGAGAGAAGTTGTTAAAACACGTTTTATGGTCAAATGGGCCGGAAACTCAGTCTCCGACCGTCGGAAACAAACAGTGCGCCGGCAAGGATTTCGTTGTGTTTATCGCGAGGCTTTTGATTGTTGAATTGTTTCTTCGTTATGATTCTTTTGATATTGAAGTTGGAGCTTCGCCGTTGGGAGCTGCCGTCACGGTAACTTCTTTGAAGAAAGCTAGTTTTTAA 1572 44.78 MSTTSISLPYLQFRCPQKQSKTKTPKISIRRPICLADGPSVQTQQRTTPHLEKTKLPLRKIPGDCGPPFFGPMKDRFDYFYNQGREEYLKSRMHRYESTVFRANMPPGPFIASDPRVVVLLDGKSFPVLFDSSKVDKTNIFTGTFMPSTALTGGYRVLSYLDPAEPNHDNLKTLIFHLLKTSRDRILPEFHSSYSELFQTLEKELSFHGKAEFGPPSEQAAFNFLARSLLDTNPADTKLGLDGPKIISKWVLFQLGPVLTLGLPKVVEEILLRTVRPPPSLIKSDYEKLYQFFHKSAPESFFSEAERLGVSKEEACHNLLFTTCFNSFGGMKILFSNMIKWIGRGGLNLHTDLAREIRSVVKSNGGRITMAGLENMPLTKSVVYETLRIEPPVALQYGRAKRDMIIESHDAAFEVKEGEVIFGYQPFATRDPKIFERSEEFVGDRFIGEEGEKLLKHVLWSNGPETQSPTVGNKQCAGKDFVVFIARLLIVELFLRYDSFDIEVGASPLGAAVTVTSLKKASF 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4463666 4465237 - evm.model.ptg000015l.686 HCH4g0686 542930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0686 523 PANTHER CYTOCHROME P450 26 60 497 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
HCH4g0686 523 CDD CYP74 90 516 - -
HCH4g0686 523 Pfam Cytochrome P450 353 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0686 523 SUPERFAMILY Cytochrome P450 57 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0686 523 PRINTS E-class P450 group IV signature 376 392 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0686 523 PRINTS E-class P450 group IV signature 476 494 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0686 523 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0686 523 Gene3D Cytochrome P450 56 523 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH4g0686 523 FunFam Allene oxide synthase, chloroplastic 56 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0251 HCH-Chr7:1733306 HCH4g0686 HCH-Chr4:4463666 7.40E-100 transposed
HCH4g0686 HCH-Chr4:4463666 HCH7g0605 HCH-Chr7:5720060 5.80E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0686 K01723 - csv:101221732 756.133