Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH4g0706 | ATGACGTCAGATGGGGCAACTTCTGCTTCCACTTGTCGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAATCGAACCCGTGAGCGGCGGAGGAGAGCTATGGCTGCCAAAATTTACTCCGGTCTTAGGGCTCAGGGGAATTTTAATCTCCCTAAACACTGCGATAATAATGAGGTTCTTAAAGCTCTTTGTGCTGAAGCTGGTTGGACCGTTGAAGAAGACGGAACCACTTACCGGAAGGGATCTAGGCCACCCCCACTTGATATTGTAGGCAGTTCCACCAAAATCACTCCCTATTCTTCTCAGAATCCAAGTCCATTGTCTTCCTCATTCCCGAGCCCTATTGCTTCCTACCAAGTTAGCCCCTCATCGTCGTCTTTCCCGAGCCCGTCTCGTTTCGAGGCTAACAATCCATCAAATCTCATTCCGTATCTTCGTCAAGCGATTCCAATATCTCTTCCTCAGCTTCGAATCTCGAACAGTGCTCCTGTGACCCCTCCTCTTTCATCCCCAGCCTCAAGGACTCCCCAGTTAATGCATAACTGGGAGGTGACTGCTAAAGAATCGTTATCTTCCTTGAATTACCCTTTCTTTGCTGTATCTGCTCCGGCTAGCCCAACTCGTCATCAGCTGCATACTCCGGCCACAATCCATGAAGGTGATGAGTCTGAATCATCCACCAATGATTCTGGTCAATGGGGAATTCATCGAGCCTATGGGCCTTCTGCATCTACAGTGCCAACATCTCCTACTTTTAACCTTGTGAAACGTGCTAATCAGAATGTTCTGCACCATAATCTAATAGAAGAAAACGGAAGAGGAAATGAGTTTGAGTTCTTGGGATTATGCAAGGTTAAGCCATGGGAAGGGGAGAAGATCCACGAAGTCGGATTGGAAGATGATTTAGAGCTCACGCTTGGCAGCGGTAAGGCCTGA | 936 | 48.18 | MTSDGATSASTCRRKPSWRERENNRTRERRRRAMAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGSRPPPLDIVGSSTKITPYSSQNPSPLSSSFPSPIASYQVSPSSSSFPSPSRFEANNPSNLIPYLRQAIPISLPQLRISNSAPVTPPLSSPASRTPQLMHNWEVTAKESLSSLNYPFFAVSAPASPTRHQLHTPATIHEGDESESSTNDSGQWGIHRAYGPSASTVPTSPTFNLVKRANQNVLHHNLIEENGRGNEFEFLGLCKVKPWEGEKIHEVGLEDDLELTLGSGKA | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4591031 | 4592297 | + | evm.model.ptg000015l.706 | HCH4g0706 | 542950 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH4g0706 | 311 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 13 | 135 | IPR008540 | - | |
HCH4g0706 | 311 | MobiDBLite | consensus disorder prediction | 75 | 133 | - | - | |
HCH4g0706 | 311 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - | |
HCH4g0706 | 311 | MobiDBLite | consensus disorder prediction | 93 | 133 | - | - | |
HCH4g0706 | 311 | MobiDBLite | consensus disorder prediction | 214 | 247 | - | - | |
HCH4g0706 | 311 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
HCH4g0706 | 311 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 12 | 310 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH4g0706 | HCH-Chr4:4591031 | HCH6g0624 | HCH-Chr6:37496919 | 8.00E-47 | dispersed | |
HCH14g0542 | HCH-Chr14:34338236 | HCH4g0706 | HCH-Chr4:4591031 | 2.20E-76 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
33466 | PF05687 | BES1_N | 5.00E-60 | No_clan | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH4g0706 | K14503 | - | csv:101219853 | 476.863 |